Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 LINC01311-201ENST00000565162 1445 ntBASIC8.3□□□□□ -1.08
MACF1Q9UPN3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 GCSHP2-201ENST00000560971 527 ntBASIC8.29□□□□□ -1.08
MACF1Q9UPN3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 AP001005.1-201ENST00000571755 1248 ntBASIC8.29□□□□□ -1.08
MACF1Q9UPN3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC8.29□□□□□ -1.08
MACF1Q9UPN3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 KSR1P1-201ENST00000446298 240 ntBASIC8.29□□□□□ -1.08
MACF1Q9UPN3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 AC073648.2-201ENST00000510116 352 ntBASIC8.29□□□□□ -1.08
MACF1Q9UPN3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 PAWRP1-201ENST00000451083 565 ntBASIC8.29□□□□□ -1.08
MACF1Q9UPN3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 AL353719.1-201ENST00000566847 864 ntBASIC8.29□□□□□ -1.08
MACF1Q9UPN3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC8.29□□□□□ -1.08
MACF1Q9UPN3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 SPDYE13P-201ENST00000445314 798 ntBASIC8.28□□□□□ -1.08
MACF1Q9UPN3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 AP006288.1-201ENST00000446065 395 ntBASIC8.28□□□□□ -1.08
MACF1Q9UPN3 PNN-202ENST00000553331 656 ntTSL 3 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 AC211486.1-202ENST00000416371 468 ntBASIC8.28□□□□□ -1.08
MACF1Q9UPN3 AC245052.3-201ENST00000450182 901 ntBASIC8.28□□□□□ -1.08
MACF1Q9UPN3 KRT16P4-201ENST00000453883 522 ntBASIC8.28□□□□□ -1.08
MACF1Q9UPN3 AC211476.1-201ENST00000503899 468 ntBASIC8.28□□□□□ -1.08
MACF1Q9UPN3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
MACF1Q9UPN3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms