Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CAPN11Q9UMQ6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CAPN11Q9UMQ6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CAPN11Q9UMQ6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CAPN11Q9UMQ6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.58■■□□□ 1.04
CAPN11Q9UMQ6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CAPN11Q9UMQ6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CAPN11Q9UMQ6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CAPN11Q9UMQ6 TNXA-203ENST00000507684 2038 ntBASIC21.58■■□□□ 1.04
CAPN11Q9UMQ6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CAPN11Q9UMQ6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CAPN11Q9UMQ6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.58■■□□□ 1.04
CAPN11Q9UMQ6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CAPN11Q9UMQ6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.58■■□□□ 1.04
CAPN11Q9UMQ6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.57■■□□□ 1.04
CAPN11Q9UMQ6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 NTF6G-201ENST00000591094 616 ntBASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 AC100791.3-201ENST00000617619 330 ntBASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 AC013268.1-206ENST00000638368 961 ntBASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 AC112229.1-201ENST00000639295 961 ntBASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.56■■□□□ 1.04
CAPN11Q9UMQ6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 KRT16P6-202ENST00000425692 1426 ntBASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 AL031963.3-201ENST00000606441 850 ntBASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN11Q9UMQ6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN11Q9UMQ6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN11Q9UMQ6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN11Q9UMQ6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN11Q9UMQ6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN11Q9UMQ6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN11Q9UMQ6 MCRIP2P1-201ENST00000394346 511 ntBASIC21.54■■□□□ 1.04
CAPN11Q9UMQ6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.54■■□□□ 1.04
CAPN11Q9UMQ6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CAPN11Q9UMQ6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN11Q9UMQ6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN11Q9UMQ6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms