Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 KRT8P36-201ENST00000489121 1440 ntBASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 AC090192.1-201ENST00000517740 490 ntBASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 LETM1P2-201ENST00000597330 2178 ntBASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00474Q9P2X8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 AC092720.2-201ENST00000602388 1665 ntBASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00474Q9P2X8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00474Q9P2X8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00474Q9P2X8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00474Q9P2X8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00474Q9P2X8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00474Q9P2X8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00474Q9P2X8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00474Q9P2X8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00474Q9P2X8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00474Q9P2X8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00474Q9P2X8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC00474Q9P2X8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC00474Q9P2X8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LINC00474Q9P2X8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00474Q9P2X8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00474Q9P2X8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00474Q9P2X8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms