Protein–RNA interactions for Protein: Q9NX08

COMMD8, COMM domain-containing protein 8, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD8Q9NX08 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
COMMD8Q9NX08 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
COMMD8Q9NX08 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
COMMD8Q9NX08 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
COMMD8Q9NX08 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COMMD8Q9NX08 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.89■□□□□ 0.94
COMMD8Q9NX08 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.89■□□□□ 0.93
COMMD8Q9NX08 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.89■□□□□ 0.93
COMMD8Q9NX08 KRASP1-201ENST00000407852 552 ntBASIC20.89■□□□□ 0.93
COMMD8Q9NX08 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
COMMD8Q9NX08 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.89■□□□□ 0.93
COMMD8Q9NX08 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
COMMD8Q9NX08 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD8Q9NX08 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD8Q9NX08 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.89■□□□□ 0.93
COMMD8Q9NX08 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD8Q9NX08 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD8Q9NX08 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 AC093827.2-201ENST00000512654 315 ntBASIC20.88■□□□□ 0.93
COMMD8Q9NX08 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.88■□□□□ 0.93
COMMD8Q9NX08 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 AC008550.1-201ENST00000511500 884 ntBASIC20.87■□□□□ 0.93
COMMD8Q9NX08 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 AC124283.5-201ENST00000624661 1809 ntBASIC20.87■□□□□ 0.93
COMMD8Q9NX08 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD8Q9NX08 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 MIR718-201ENST00000390190 70 ntBASIC20.86■□□□□ 0.93
COMMD8Q9NX08 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 AC020907.5-201ENST00000624372 1936 ntBASIC20.86■□□□□ 0.93
COMMD8Q9NX08 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD8Q9NX08 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD8Q9NX08 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.85■□□□□ 0.93
COMMD8Q9NX08 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.85■□□□□ 0.93
COMMD8Q9NX08 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD8Q9NX08 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD8Q9NX08 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD8Q9NX08 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.85■□□□□ 0.93
COMMD8Q9NX08 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.85■□□□□ 0.93
COMMD8Q9NX08 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.85■□□□□ 0.93
COMMD8Q9NX08 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.85■□□□□ 0.93
COMMD8Q9NX08 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.85■□□□□ 0.93
COMMD8Q9NX08 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.85■□□□□ 0.93
COMMD8Q9NX08 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.85■□□□□ 0.93
COMMD8Q9NX08 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.85■□□□□ 0.93
COMMD8Q9NX08 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD8Q9NX08 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms