Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.84■□□□□ 0.45
PARPBPQ9NWS1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PARPBPQ9NWS1 DPP3P2-201ENST00000416030 1696 ntBASIC17.83■□□□□ 0.45
PARPBPQ9NWS1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.83■□□□□ 0.45
PARPBPQ9NWS1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PARPBPQ9NWS1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PARPBPQ9NWS1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PARPBPQ9NWS1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PARPBPQ9NWS1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PARPBPQ9NWS1 FEM1AP1-201ENST00000431297 1995 ntBASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 KRT8P20-201ENST00000423953 1409 ntBASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 RNA5SP413-201ENST00000516373 109 ntBASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.82■□□□□ 0.44
PARPBPQ9NWS1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 CD99P1-205ENST00000527459 561 ntBASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 PNMA6B-201ENST00000538162 1200 ntBASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 AC005829.2-201ENST00000571422 1056 ntBASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.81■□□□□ 0.44
PARPBPQ9NWS1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms