Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMG20AQ9NP66 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 AL032819.2-201ENST00000624543 2162 ntBASIC18.1■□□□□ 0.49
HMG20AQ9NP66 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 AC008406.3-201ENST00000620001 1374 ntBASIC18.1■□□□□ 0.49
HMG20AQ9NP66 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.1■□□□□ 0.49
HMG20AQ9NP66 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 AC135279.3-201ENST00000610945 1311 ntBASIC18.09■□□□□ 0.49
HMG20AQ9NP66 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 AC233992.3-201ENST00000607491 485 ntBASIC18.09■□□□□ 0.49
HMG20AQ9NP66 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMG20AQ9NP66 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMG20AQ9NP66 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMG20AQ9NP66 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMG20AQ9NP66 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.08■□□□□ 0.49
HMG20AQ9NP66 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMG20AQ9NP66 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMG20AQ9NP66 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HMG20AQ9NP66 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMG20AQ9NP66 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
HMG20AQ9NP66 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.08■□□□□ 0.48
HMG20AQ9NP66 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.08■□□□□ 0.48
HMG20AQ9NP66 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.08■□□□□ 0.48
HMG20AQ9NP66 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.08■□□□□ 0.48
HMG20AQ9NP66 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.08■□□□□ 0.48
HMG20AQ9NP66 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMG20AQ9NP66 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.08■□□□□ 0.48
HMG20AQ9NP66 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMG20AQ9NP66 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMG20AQ9NP66 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HMG20AQ9NP66 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.08■□□□□ 0.48
HMG20AQ9NP66 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMG20AQ9NP66 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMG20AQ9NP66 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.07■□□□□ 0.48
HMG20AQ9NP66 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMG20AQ9NP66 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.07■□□□□ 0.48
HMG20AQ9NP66 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMG20AQ9NP66 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMG20AQ9NP66 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.07■□□□□ 0.48
HMG20AQ9NP66 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMG20AQ9NP66 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMG20AQ9NP66 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMG20AQ9NP66 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMG20AQ9NP66 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.07■□□□□ 0.48
HMG20AQ9NP66 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms