Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 BX119927.1-201ENST00000636596 1552 ntBASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF556Q9HAH1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 AC091305.1-201ENST00000479476 895 ntBASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 AL355001.2-201ENST00000620617 1191 ntBASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 AL358852.1-201ENST00000623174 1268 ntBASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ZNF556Q9HAH1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ZNF556Q9HAH1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 FAM21FP-204ENST00000608637 956 ntBASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 AC106739.1-201ENST00000617035 715 ntBASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF556Q9HAH1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 TNXA-203ENST00000507684 2038 ntBASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF556Q9HAH1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms