Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD9Q9H8M2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.7■□□□□ 0.9
BRD9Q9H8M2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.7■□□□□ 0.9
BRD9Q9H8M2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.7■□□□□ 0.9
BRD9Q9H8M2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRD9Q9H8M2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.7■□□□□ 0.9
BRD9Q9H8M2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD9Q9H8M2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 AP002982.1-201ENST00000492365 877 ntBASIC20.69■□□□□ 0.9
BRD9Q9H8M2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD9Q9H8M2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 RN7SL850P-201ENST00000579959 291 ntBASIC20.68■□□□□ 0.9
BRD9Q9H8M2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 MIR2861-201ENST00000636310 90 ntBASIC20.68■□□□□ 0.9
BRD9Q9H8M2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRD9Q9H8M2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD9Q9H8M2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRD9Q9H8M2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.67■□□□□ 0.9
BRD9Q9H8M2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD9Q9H8M2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
BRD9Q9H8M2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.67■□□□□ 0.9
BRD9Q9H8M2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.67■□□□□ 0.9
BRD9Q9H8M2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.67■□□□□ 0.9
BRD9Q9H8M2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
BRD9Q9H8M2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRD9Q9H8M2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRD9Q9H8M2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BRD9Q9H8M2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.66■□□□□ 0.9
BRD9Q9H8M2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BRD9Q9H8M2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
BRD9Q9H8M2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRD9Q9H8M2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.66■□□□□ 0.9
BRD9Q9H8M2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BRD9Q9H8M2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.66■□□□□ 0.9
BRD9Q9H8M2 AL445228.2-201ENST00000605589 952 ntBASIC20.66■□□□□ 0.9
BRD9Q9H8M2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BRD9Q9H8M2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRD9Q9H8M2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRD9Q9H8M2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRD9Q9H8M2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRD9Q9H8M2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 RBM17P1-201ENST00000453646 1190 ntBASIC20.65■□□□□ 0.9
BRD9Q9H8M2 NUDT16P1-203ENST00000513809 620 ntBASIC20.65■□□□□ 0.9
BRD9Q9H8M2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 MIR6786-201ENST00000616843 113 ntBASIC20.65■□□□□ 0.9
BRD9Q9H8M2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRD9Q9H8M2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BRD9Q9H8M2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRD9Q9H8M2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
BRD9Q9H8M2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.64■□□□□ 0.89
BRD9Q9H8M2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRD9Q9H8M2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRD9Q9H8M2 UNC93B2-201ENST00000285383 730 ntBASIC20.64■□□□□ 0.89
BRD9Q9H8M2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms