Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SH2D4AQ9H788 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.35■■□□□ 1.33
SH2D4AQ9H788 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SH2D4AQ9H788 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SH2D4AQ9H788 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SH2D4AQ9H788 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.35■■□□□ 1.33
SH2D4AQ9H788 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SH2D4AQ9H788 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.34■■□□□ 1.33
SH2D4AQ9H788 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 AC113410.3-201ENST00000623366 203 ntBASIC23.34■■□□□ 1.33
SH2D4AQ9H788 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 FP700111.2-201ENST00000619190 1892 ntBASIC23.34■■□□□ 1.33
SH2D4AQ9H788 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 AF106564.1-201ENST00000607058 2553 ntBASIC23.34■■□□□ 1.33
SH2D4AQ9H788 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.34■■□□□ 1.33
SH2D4AQ9H788 KRT8P17-201ENST00000453110 1448 ntBASIC23.33■■□□□ 1.33
SH2D4AQ9H788 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH2D4AQ9H788 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH2D4AQ9H788 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
SH2D4AQ9H788 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SH2D4AQ9H788 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.33■■□□□ 1.33
SH2D4AQ9H788 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.33■■□□□ 1.33
SH2D4AQ9H788 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH2D4AQ9H788 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH2D4AQ9H788 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.33■■□□□ 1.33
SH2D4AQ9H788 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SH2D4AQ9H788 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 HTR7P1-201ENST00000538670 1336 ntBASIC23.32■■□□□ 1.32
SH2D4AQ9H788 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH2D4AQ9H788 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH2D4AQ9H788 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH2D4AQ9H788 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH2D4AQ9H788 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH2D4AQ9H788 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.3■■□□□ 1.32
SH2D4AQ9H788 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.3■■□□□ 1.32
SH2D4AQ9H788 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.3■■□□□ 1.32
SH2D4AQ9H788 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.3■■□□□ 1.32
SH2D4AQ9H788 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH2D4AQ9H788 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH2D4AQ9H788 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SH2D4AQ9H788 PKD1P6-201ENST00000343738 4769 ntBASIC23.3■■□□□ 1.32
SH2D4AQ9H788 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.3■■□□□ 1.32
SH2D4AQ9H788 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SH2D4AQ9H788 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms