Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX47Q9H0S4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 Z82202.1-201ENST00000623446 1880 ntBASIC20.78■□□□□ 0.92
DDX47Q9H0S4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 SLC7A5P1-201ENST00000568957 537 ntBASIC20.78■□□□□ 0.92
DDX47Q9H0S4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX47Q9H0S4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 TERF1P2-201ENST00000583350 1212 ntBASIC20.77■□□□□ 0.92
DDX47Q9H0S4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
DDX47Q9H0S4 AC004854.2-201ENST00000608450 1441 ntBASIC20.77■□□□□ 0.91
DDX47Q9H0S4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
DDX47Q9H0S4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
DDX47Q9H0S4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
DDX47Q9H0S4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.91
DDX47Q9H0S4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.76■□□□□ 0.91
DDX47Q9H0S4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 CDV3P1-201ENST00000471403 739 ntBASIC20.76■□□□□ 0.91
DDX47Q9H0S4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 AL356652.1-201ENST00000615962 565 ntBASIC20.76■□□□□ 0.91
DDX47Q9H0S4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX47Q9H0S4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX47Q9H0S4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX47Q9H0S4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms