Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXP3Q9BZS1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXP3Q9BZS1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
FOXP3Q9BZS1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXP3Q9BZS1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXP3Q9BZS1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXP3Q9BZS1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXP3Q9BZS1 GUSBP6-202ENST00000438529 1198 ntBASIC20.58■□□□□ 0.89
FOXP3Q9BZS1 AL138781.1-201ENST00000566567 1274 ntBASIC20.58■□□□□ 0.89
FOXP3Q9BZS1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.58■□□□□ 0.89
FOXP3Q9BZS1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXP3Q9BZS1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.58■□□□□ 0.88
FOXP3Q9BZS1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.58■□□□□ 0.88
FOXP3Q9BZS1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.58■□□□□ 0.88
FOXP3Q9BZS1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FOXP3Q9BZS1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXP3Q9BZS1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXP3Q9BZS1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.58■□□□□ 0.88
FOXP3Q9BZS1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXP3Q9BZS1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FOXP3Q9BZS1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXP3Q9BZS1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.58■□□□□ 0.88
FOXP3Q9BZS1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 SLC7A5P1-201ENST00000568957 537 ntBASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXP3Q9BZS1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 CNN2P6-201ENST00000439038 900 ntBASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXP3Q9BZS1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 RBM17P2-201ENST00000616397 1405 ntBASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 SLC29A4P1-201ENST00000398760 971 ntBASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 TSPY20P-201ENST00000450910 630 ntBASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXP3Q9BZS1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 AC005332.7-201ENST00000614046 2005 ntBASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXP3Q9BZS1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms