Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.82■□□□□ 0.6
TUBA1CQ9BQE3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA1CQ9BQE3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBA1CQ9BQE3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBA1CQ9BQE3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.82■□□□□ 0.6
TUBA1CQ9BQE3 AL121832.2-201ENST00000610979 668 ntBASIC18.82■□□□□ 0.6
TUBA1CQ9BQE3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA1CQ9BQE3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TUBA1CQ9BQE3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA1CQ9BQE3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA1CQ9BQE3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA1CQ9BQE3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA1CQ9BQE3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TUBA1CQ9BQE3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 AC083906.2-201ENST00000511578 360 ntBASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBA1CQ9BQE3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1CQ9BQE3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 AL355802.2-201ENST00000402069 882 ntBASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TUBA1CQ9BQE3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 AC068338.2-201ENST00000563278 1430 ntBASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 AC007322.4-201ENST00000509611 723 ntBASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.78■□□□□ 0.6
TUBA1CQ9BQE3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 RBM17P2-201ENST00000616397 1405 ntBASIC18.77■□□□□ 0.6
TUBA1CQ9BQE3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms