Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.14■□□□□ 0.49
SPENQ96T58 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPENQ96T58 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPENQ96T58 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SPENQ96T58 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPENQ96T58 ECEL1P2-202ENST00000465689 757 ntBASIC18.13■□□□□ 0.49
SPENQ96T58 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.13■□□□□ 0.49
SPENQ96T58 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPENQ96T58 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPENQ96T58 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.13■□□□□ 0.49
SPENQ96T58 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.13■□□□□ 0.49
SPENQ96T58 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPENQ96T58 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.13■□□□□ 0.49
SPENQ96T58 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
SPENQ96T58 AC116562.2-201ENST00000507042 360 ntBASIC18.13■□□□□ 0.49
SPENQ96T58 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SPENQ96T58 AC026271.3-201ENST00000571884 352 ntBASIC18.13■□□□□ 0.49
SPENQ96T58 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPENQ96T58 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPENQ96T58 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPENQ96T58 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.13■□□□□ 0.49
SPENQ96T58 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPENQ96T58 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.12■□□□□ 0.49
SPENQ96T58 DUSP5P1-201ENST00000441325 1139 ntBASIC18.12■□□□□ 0.49
SPENQ96T58 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
SPENQ96T58 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPENQ96T58 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPENQ96T58 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPENQ96T58 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.12■□□□□ 0.49
SPENQ96T58 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SPENQ96T58 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
SPENQ96T58 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.12■□□□□ 0.49
SPENQ96T58 AC073195.1-201ENST00000607241 877 ntBASIC18.12■□□□□ 0.49
SPENQ96T58 AC004264.1-201ENST00000608354 794 ntBASIC18.12■□□□□ 0.49
SPENQ96T58 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPENQ96T58 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.12■□□□□ 0.49
SPENQ96T58 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SPENQ96T58 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SPENQ96T58 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPENQ96T58 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPENQ96T58 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPENQ96T58 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SPENQ96T58 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SPENQ96T58 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.12■□□□□ 0.49
SPENQ96T58 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPENQ96T58 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPENQ96T58 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.12■□□□□ 0.49
SPENQ96T58 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SPENQ96T58 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SPENQ96T58 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SPENQ96T58 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.11■□□□□ 0.49
SPENQ96T58 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 AL031963.3-201ENST00000606441 850 ntBASIC18.11■□□□□ 0.49
SPENQ96T58 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.11■□□□□ 0.49
SPENQ96T58 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.11■□□□□ 0.49
SPENQ96T58 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.11■□□□□ 0.49
SPENQ96T58 KRT18P56-201ENST00000507275 550 ntBASIC18.11■□□□□ 0.49
SPENQ96T58 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.11■□□□□ 0.49
SPENQ96T58 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.11■□□□□ 0.49
SPENQ96T58 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SPENQ96T58 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SPENQ96T58 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SPENQ96T58 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPENQ96T58 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.1■□□□□ 0.49
SPENQ96T58 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SPENQ96T58 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SPENQ96T58 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.1■□□□□ 0.49
SPENQ96T58 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPENQ96T58 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.1■□□□□ 0.49
SPENQ96T58 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SPENQ96T58 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPENQ96T58 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPENQ96T58 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
SPENQ96T58 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SPENQ96T58 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.1■□□□□ 0.49
SPENQ96T58 AL121829.2-201ENST00000620908 328 ntBASIC18.1■□□□□ 0.49
SPENQ96T58 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SPENQ96T58 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPENQ96T58 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.09■□□□□ 0.49
SPENQ96T58 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPENQ96T58 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.09■□□□□ 0.49
SPENQ96T58 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SPENQ96T58 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SPENQ96T58 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPENQ96T58 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPENQ96T58 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPENQ96T58 TSPY14P-201ENST00000303979 915 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms