Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TWNKQ96RR1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TWNKQ96RR1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TWNKQ96RR1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TWNKQ96RR1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.25■□□□□ 0.99
TWNKQ96RR1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.25■□□□□ 0.99
TWNKQ96RR1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TWNKQ96RR1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TWNKQ96RR1 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.25■□□□□ 0.99
TWNKQ96RR1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.25■□□□□ 0.99
TWNKQ96RR1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.25■□□□□ 0.99
TWNKQ96RR1 AC233263.1-201ENST00000578059 224 ntBASIC21.25■□□□□ 0.99
TWNKQ96RR1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TWNKQ96RR1 AL691432.2-201ENST00000607222 2038 ntBASIC21.25■□□□□ 0.99
TWNKQ96RR1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.25■□□□□ 0.99
TWNKQ96RR1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TWNKQ96RR1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TWNKQ96RR1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.25■□□□□ 0.99
TWNKQ96RR1 AC073130.3-201ENST00000624389 2278 ntBASIC21.25■□□□□ 0.99
TWNKQ96RR1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TWNKQ96RR1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TWNKQ96RR1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TWNKQ96RR1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TWNKQ96RR1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 ABHD17AP1-201ENST00000358206 933 ntBASIC21.24■□□□□ 0.99
TWNKQ96RR1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 POU5F1P3-201ENST00000428824 1078 ntBASIC21.24■□□□□ 0.99
TWNKQ96RR1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.24■□□□□ 0.99
TWNKQ96RR1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 AC120498.8-201ENST00000614275 531 ntBASIC21.24■□□□□ 0.99
TWNKQ96RR1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.24■□□□□ 0.99
TWNKQ96RR1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.24■□□□□ 0.99
TWNKQ96RR1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TWNKQ96RR1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
TWNKQ96RR1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
TWNKQ96RR1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.23■□□□□ 0.99
TWNKQ96RR1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TWNKQ96RR1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TWNKQ96RR1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
TWNKQ96RR1 PCDHAC2-203ENST00000615316 3011 ntBASIC21.23■□□□□ 0.99
TWNKQ96RR1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TWNKQ96RR1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TWNKQ96RR1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TWNKQ96RR1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TWNKQ96RR1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TWNKQ96RR1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TWNKQ96RR1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.23■□□□□ 0.99
TWNKQ96RR1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.23■□□□□ 0.99
TWNKQ96RR1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.23■□□□□ 0.99
TWNKQ96RR1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.23■□□□□ 0.99
TWNKQ96RR1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.23■□□□□ 0.99
TWNKQ96RR1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TWNKQ96RR1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TWNKQ96RR1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TWNKQ96RR1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TWNKQ96RR1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TWNKQ96RR1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
TWNKQ96RR1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.22■□□□□ 0.99
TWNKQ96RR1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TWNKQ96RR1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TWNKQ96RR1 RPS2P52-201ENST00000469610 820 ntBASIC21.22■□□□□ 0.99
TWNKQ96RR1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TWNKQ96RR1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.22■□□□□ 0.99
TWNKQ96RR1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.22■□□□□ 0.99
TWNKQ96RR1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TWNKQ96RR1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.22■□□□□ 0.99
TWNKQ96RR1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TWNKQ96RR1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
TWNKQ96RR1 TCF3P1-201ENST00000423021 1937 ntBASIC21.21■□□□□ 0.99
TWNKQ96RR1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TWNKQ96RR1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.21■□□□□ 0.99
TWNKQ96RR1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TWNKQ96RR1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TWNKQ96RR1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.21■□□□□ 0.99
TWNKQ96RR1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.21■□□□□ 0.99
TWNKQ96RR1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.21■□□□□ 0.99
TWNKQ96RR1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.21■□□□□ 0.99
TWNKQ96RR1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.21■□□□□ 0.99
TWNKQ96RR1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.21■□□□□ 0.99
TWNKQ96RR1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.21■□□□□ 0.99
TWNKQ96RR1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.21■□□□□ 0.99
TWNKQ96RR1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TWNKQ96RR1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TWNKQ96RR1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TWNKQ96RR1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TWNKQ96RR1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms