Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 BCL2-203ENST00000589955 5011 ntBASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IPQ96QF0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.47■□□□□ 0.71
RAB3IPQ96QF0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 AL032819.2-201ENST00000624543 2162 ntBASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 PCDHB18P-201ENST00000524813 2368 ntBASIC19.46■□□□□ 0.71
RAB3IPQ96QF0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3IPQ96QF0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3IPQ96QF0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms