Protein–RNA interactions for Protein: Q96Q77

CIB3, Calcium and integrin-binding family member 3, humanhuman

Predicted RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIB3Q96Q77 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CIB3Q96Q77 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CIB3Q96Q77 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.12■□□□□ 0.17
CIB3Q96Q77 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.12■□□□□ 0.17
CIB3Q96Q77 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CIB3Q96Q77 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CIB3Q96Q77 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CIB3Q96Q77 AC026471.1-201ENST00000564629 3026 ntBASIC16.11■□□□□ 0.17
CIB3Q96Q77 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CIB3Q96Q77 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CIB3Q96Q77 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CIB3Q96Q77 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.11■□□□□ 0.17
CIB3Q96Q77 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CIB3Q96Q77 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CIB3Q96Q77 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CIB3Q96Q77 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.11■□□□□ 0.17
CIB3Q96Q77 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.11■□□□□ 0.17
CIB3Q96Q77 DUX4L2-201ENST00000561772 1275 ntBASIC16.11■□□□□ 0.17
CIB3Q96Q77 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CIB3Q96Q77 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.11■□□□□ 0.17
CIB3Q96Q77 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
CIB3Q96Q77 DUX4L6-201ENST00000626483 1275 ntBASIC16.11■□□□□ 0.17
CIB3Q96Q77 DUX4L1-201ENST00000627662 1275 ntBASIC16.11■□□□□ 0.17
CIB3Q96Q77 DUX4L8-201ENST00000629013 1275 ntBASIC16.11■□□□□ 0.17
CIB3Q96Q77 DUX4L3-201ENST00000630187 1275 ntBASIC16.11■□□□□ 0.17
CIB3Q96Q77 DUX4L7-201ENST00000630678 1275 ntBASIC16.11■□□□□ 0.17
CIB3Q96Q77 DUX4L5-201ENST00000630834 1275 ntBASIC16.11■□□□□ 0.17
CIB3Q96Q77 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CIB3Q96Q77 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CIB3Q96Q77 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
CIB3Q96Q77 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CIB3Q96Q77 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.11■□□□□ 0.17
CIB3Q96Q77 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CIB3Q96Q77 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.11■□□□□ 0.17
CIB3Q96Q77 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CIB3Q96Q77 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CIB3Q96Q77 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CIB3Q96Q77 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CIB3Q96Q77 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CIB3Q96Q77 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CIB3Q96Q77 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.1■□□□□ 0.17
CIB3Q96Q77 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.1■□□□□ 0.17
CIB3Q96Q77 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CIB3Q96Q77 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CIB3Q96Q77 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CIB3Q96Q77 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CIB3Q96Q77 PGM5P4-201ENST00000421970 445 ntBASIC16.1■□□□□ 0.17
CIB3Q96Q77 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.1■□□□□ 0.17
CIB3Q96Q77 AC106739.1-201ENST00000617035 715 ntBASIC16.1■□□□□ 0.17
CIB3Q96Q77 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CIB3Q96Q77 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.1■□□□□ 0.17
CIB3Q96Q77 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CIB3Q96Q77 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.1■□□□□ 0.17
CIB3Q96Q77 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CIB3Q96Q77 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CIB3Q96Q77 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CIB3Q96Q77 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CIB3Q96Q77 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CIB3Q96Q77 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.1■□□□□ 0.17
CIB3Q96Q77 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CIB3Q96Q77 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CIB3Q96Q77 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CIB3Q96Q77 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CIB3Q96Q77 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.09■□□□□ 0.17
CIB3Q96Q77 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.09■□□□□ 0.17
CIB3Q96Q77 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 AC093484.2-201ENST00000580996 2166 ntBASIC16.09■□□□□ 0.17
CIB3Q96Q77 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.09■□□□□ 0.17
CIB3Q96Q77 TREX1-205ENST00000625293 1783 ntBASIC16.09■□□□□ 0.17
CIB3Q96Q77 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.09■□□□□ 0.17
CIB3Q96Q77 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 AC243732.1-201ENST00000612648 864 ntBASIC16.09■□□□□ 0.17
CIB3Q96Q77 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CIB3Q96Q77 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.09■□□□□ 0.17
CIB3Q96Q77 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.09■□□□□ 0.17
CIB3Q96Q77 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CIB3Q96Q77 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CIB3Q96Q77 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CIB3Q96Q77 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.08■□□□□ 0.17
CIB3Q96Q77 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CIB3Q96Q77 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CIB3Q96Q77 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.08■□□□□ 0.16
CIB3Q96Q77 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.08■□□□□ 0.16
CIB3Q96Q77 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.08■□□□□ 0.16
CIB3Q96Q77 MIR939-201ENST00000401314 82 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms