Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NECTIN4Q96NY8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NECTIN4Q96NY8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.77■□□□□ 0.92
NECTIN4Q96NY8 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.77■□□□□ 0.92
NECTIN4Q96NY8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.77■□□□□ 0.92
NECTIN4Q96NY8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.77■□□□□ 0.92
NECTIN4Q96NY8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.77■□□□□ 0.92
NECTIN4Q96NY8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NECTIN4Q96NY8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NECTIN4Q96NY8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NECTIN4Q96NY8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NECTIN4Q96NY8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 BX664615.1-201ENST00000443558 458 ntBASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 AC091076.1-201ENST00000610741 619 ntBASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.76■□□□□ 0.91
NECTIN4Q96NY8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 C1QL1P1-201ENST00000568105 661 ntBASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NECTIN4Q96NY8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN4Q96NY8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 MESTP1-201ENST00000404287 994 ntBASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 AK4P3-201ENST00000418260 669 ntBASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NECTIN4Q96NY8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 PTBP1P-201ENST00000554374 1601 ntBASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 ECEL1P2-202ENST00000465689 757 ntBASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 B3GAT3P1-201ENST00000471720 806 ntBASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 AC022616.7-201ENST00000525383 220 ntBASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
NECTIN4Q96NY8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms