Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
IFT43Q96FT9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IFT43Q96FT9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.52■□□□□ 0.88
IFT43Q96FT9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
IFT43Q96FT9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.52■□□□□ 0.88
IFT43Q96FT9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.52■□□□□ 0.88
IFT43Q96FT9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
IFT43Q96FT9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
IFT43Q96FT9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IFT43Q96FT9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.52■□□□□ 0.88
IFT43Q96FT9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
IFT43Q96FT9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.52■□□□□ 0.88
IFT43Q96FT9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
IFT43Q96FT9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.52■□□□□ 0.88
IFT43Q96FT9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
IFT43Q96FT9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
IFT43Q96FT9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IFT43Q96FT9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
IFT43Q96FT9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
IFT43Q96FT9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
IFT43Q96FT9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
IFT43Q96FT9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.52■□□□□ 0.88
IFT43Q96FT9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.52■□□□□ 0.88
IFT43Q96FT9 AC066615.1-201ENST00000640911 628 ntBASIC20.52■□□□□ 0.88
IFT43Q96FT9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
IFT43Q96FT9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
IFT43Q96FT9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.52■□□□□ 0.87
IFT43Q96FT9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
IFT43Q96FT9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
IFT43Q96FT9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.52■□□□□ 0.87
IFT43Q96FT9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
IFT43Q96FT9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IFT43Q96FT9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IFT43Q96FT9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
IFT43Q96FT9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
IFT43Q96FT9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
IFT43Q96FT9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IFT43Q96FT9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IFT43Q96FT9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
IFT43Q96FT9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IFT43Q96FT9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IFT43Q96FT9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IFT43Q96FT9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
IFT43Q96FT9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.51■□□□□ 0.87
IFT43Q96FT9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.51■□□□□ 0.87
IFT43Q96FT9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.51■□□□□ 0.87
IFT43Q96FT9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.51■□□□□ 0.87
IFT43Q96FT9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.51■□□□□ 0.87
IFT43Q96FT9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
IFT43Q96FT9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IFT43Q96FT9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
IFT43Q96FT9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
IFT43Q96FT9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IFT43Q96FT9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IFT43Q96FT9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.51■□□□□ 0.87
IFT43Q96FT9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IFT43Q96FT9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IFT43Q96FT9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
IFT43Q96FT9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.5■□□□□ 0.87
IFT43Q96FT9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 DUSP5P2-201ENST00000426873 1033 ntBASIC20.5■□□□□ 0.87
IFT43Q96FT9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 AL589743.5-201ENST00000616611 1050 ntBASIC20.5■□□□□ 0.87
IFT43Q96FT9 AC105020.6-201ENST00000621523 1217 ntBASIC20.5■□□□□ 0.87
IFT43Q96FT9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
IFT43Q96FT9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.5■□□□□ 0.87
IFT43Q96FT9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IFT43Q96FT9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.49■□□□□ 0.87
IFT43Q96FT9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms