Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE4Q96A23 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE4Q96A23 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CPNE4Q96A23 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE4Q96A23 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE4Q96A23 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE4Q96A23 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CPNE4Q96A23 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE4Q96A23 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CPNE4Q96A23 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE4Q96A23 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE4Q96A23 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE4Q96A23 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.92■□□□□ 0.46
CPNE4Q96A23 AC006557.6-201ENST00000623071 864 ntBASIC17.92■□□□□ 0.46
CPNE4Q96A23 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
CPNE4Q96A23 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CPNE4Q96A23 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE4Q96A23 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE4Q96A23 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE4Q96A23 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CPNE4Q96A23 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE4Q96A23 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CPNE4Q96A23 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE4Q96A23 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE4Q96A23 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE4Q96A23 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.91■□□□□ 0.46
CPNE4Q96A23 GABARAPL3-202ENST00000624044 1851 ntBASIC17.91■□□□□ 0.46
CPNE4Q96A23 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE4Q96A23 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE4Q96A23 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE4Q96A23 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE4Q96A23 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE4Q96A23 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE4Q96A23 KRT17P3-201ENST00000420566 1262 ntBASIC17.91■□□□□ 0.46
CPNE4Q96A23 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.91■□□□□ 0.46
CPNE4Q96A23 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CPNE4Q96A23 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.91■□□□□ 0.46
CPNE4Q96A23 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.91■□□□□ 0.46
CPNE4Q96A23 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE4Q96A23 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.91■□□□□ 0.46
CPNE4Q96A23 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE4Q96A23 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE4Q96A23 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE4Q96A23 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE4Q96A23 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE4Q96A23 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 ABHD17AP1-201ENST00000358206 933 ntBASIC17.9■□□□□ 0.46
CPNE4Q96A23 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 AC008403.3-201ENST00000598924 454 ntBASIC17.9■□□□□ 0.46
CPNE4Q96A23 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE4Q96A23 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CPNE4Q96A23 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CPNE4Q96A23 KRT16P6-202ENST00000425692 1426 ntBASIC17.89■□□□□ 0.46
CPNE4Q96A23 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.89■□□□□ 0.46
CPNE4Q96A23 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CPNE4Q96A23 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CPNE4Q96A23 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CPNE4Q96A23 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.89■□□□□ 0.45
CPNE4Q96A23 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE4Q96A23 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.89■□□□□ 0.45
CPNE4Q96A23 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms