Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S1Q92572 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
AP3S1Q92572 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
AP3S1Q92572 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
AP3S1Q92572 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
AP3S1Q92572 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S1Q92572 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S1Q92572 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
AP3S1Q92572 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S1Q92572 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.59■□□□□ 0.41
AP3S1Q92572 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
AP3S1Q92572 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S1Q92572 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S1Q92572 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.59■□□□□ 0.41
AP3S1Q92572 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S1Q92572 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
AP3S1Q92572 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S1Q92572 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S1Q92572 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.59■□□□□ 0.41
AP3S1Q92572 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.59■□□□□ 0.41
AP3S1Q92572 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S1Q92572 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
AP3S1Q92572 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.59■□□□□ 0.41
AP3S1Q92572 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.59■□□□□ 0.41
AP3S1Q92572 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.59■□□□□ 0.41
AP3S1Q92572 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.59■□□□□ 0.41
AP3S1Q92572 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.59■□□□□ 0.41
AP3S1Q92572 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S1Q92572 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S1Q92572 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S1Q92572 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
AP3S1Q92572 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S1Q92572 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S1Q92572 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.58■□□□□ 0.41
AP3S1Q92572 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP3S1Q92572 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.58■□□□□ 0.41
AP3S1Q92572 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP3S1Q92572 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.58■□□□□ 0.41
AP3S1Q92572 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
AP3S1Q92572 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
AP3S1Q92572 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
AP3S1Q92572 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP3S1Q92572 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3S1Q92572 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.58■□□□□ 0.4
AP3S1Q92572 AL033527.3-201ENST00000566366 1196 ntBASIC17.58■□□□□ 0.4
AP3S1Q92572 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
AP3S1Q92572 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP3S1Q92572 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
AP3S1Q92572 DPP3P2-201ENST00000416030 1696 ntBASIC17.58■□□□□ 0.4
AP3S1Q92572 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.58■□□□□ 0.4
AP3S1Q92572 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3S1Q92572 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.57■□□□□ 0.4
AP3S1Q92572 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
AP3S1Q92572 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.57■□□□□ 0.4
AP3S1Q92572 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.57■□□□□ 0.4
AP3S1Q92572 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S1Q92572 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.57■□□□□ 0.4
AP3S1Q92572 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S1Q92572 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S1Q92572 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S1Q92572 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S1Q92572 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.57■□□□□ 0.4
AP3S1Q92572 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
AP3S1Q92572 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.57■□□□□ 0.4
AP3S1Q92572 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S1Q92572 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S1Q92572 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S1Q92572 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
AP3S1Q92572 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S1Q92572 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
AP3S1Q92572 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S1Q92572 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S1Q92572 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
AP3S1Q92572 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
AP3S1Q92572 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S1Q92572 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.56■□□□□ 0.4
AP3S1Q92572 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.56■□□□□ 0.4
AP3S1Q92572 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.56■□□□□ 0.4
AP3S1Q92572 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
AP3S1Q92572 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.56■□□□□ 0.4
AP3S1Q92572 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S1Q92572 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S1Q92572 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S1Q92572 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S1Q92572 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S1Q92572 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
AP3S1Q92572 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S1Q92572 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
AP3S1Q92572 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.56■□□□□ 0.4
AP3S1Q92572 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.56■□□□□ 0.4
AP3S1Q92572 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.56■□□□□ 0.4
AP3S1Q92572 AL138724.1-201ENST00000606771 1088 ntBASIC17.56■□□□□ 0.4
AP3S1Q92572 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S1Q92572 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.56■□□□□ 0.4
AP3S1Q92572 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
AP3S1Q92572 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S1Q92572 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S1Q92572 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S1Q92572 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S1Q92572 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms