Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCHCR1Q8TD31 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCHCR1Q8TD31 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.79■□□□□ 0.92
CCHCR1Q8TD31 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
CCHCR1Q8TD31 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCHCR1Q8TD31 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.79■□□□□ 0.92
CCHCR1Q8TD31 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCHCR1Q8TD31 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CCHCR1Q8TD31 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCHCR1Q8TD31 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCHCR1Q8TD31 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 CDV3P1-201ENST00000471403 739 ntBASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 AC073111.5-205ENST00000641717 521 ntBASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCHCR1Q8TD31 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 AC018445.3-201ENST00000624177 1945 ntBASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 PGM5P4-201ENST00000421970 445 ntBASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 AC007322.4-201ENST00000509611 723 ntBASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.77■□□□□ 0.92
CCHCR1Q8TD31 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCHCR1Q8TD31 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 CDCA4P2-201ENST00000441182 718 ntBASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 AC026185.1-201ENST00000445748 174 ntBASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.76■□□□□ 0.91
CCHCR1Q8TD31 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 AL591742.1-201ENST00000604433 565 ntBASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 BX119927.1-201ENST00000636596 1552 ntBASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCHCR1Q8TD31 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCHCR1Q8TD31 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms