Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
ZNF439Q8NDP4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF439Q8NDP4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF439Q8NDP4 OR10C1-204ENST00000622521 1039 ntBASIC16.54■□□□□ 0.24
ZNF439Q8NDP4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ZNF439Q8NDP4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ZNF439Q8NDP4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF439Q8NDP4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF439Q8NDP4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ZNF439Q8NDP4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
ZNF439Q8NDP4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF439Q8NDP4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ZNF439Q8NDP4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 CYP2T3P-201ENST00000601990 817 ntBASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 AC080038.1-201ENST00000611274 1154 ntBASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 AC105020.6-201ENST00000621523 1217 ntBASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 AC008694.1-202ENST00000636953 945 ntBASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 AC073111.5-205ENST00000641717 521 ntBASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF439Q8NDP4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF439Q8NDP4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF439Q8NDP4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.23
ZNF439Q8NDP4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.52■□□□□ 0.23
ZNF439Q8NDP4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.52■□□□□ 0.23
ZNF439Q8NDP4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.52■□□□□ 0.23
ZNF439Q8NDP4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF439Q8NDP4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.52■□□□□ 0.23
ZNF439Q8NDP4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF439Q8NDP4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF439Q8NDP4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF439Q8NDP4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF439Q8NDP4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
ZNF439Q8NDP4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.52■□□□□ 0.23
ZNF439Q8NDP4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 AL391422.3-201ENST00000603791 2761 ntBASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 KRT18P68-201ENST00000392293 1000 ntBASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 AC005181.1-201ENST00000604782 1256 ntBASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
ZNF439Q8NDP4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms