Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 AC128676.1-201ENST00000454392 318 ntBASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 ITM2C-210ENST00000620962 501 ntBASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 AC073648.6-201ENST00000641589 218 ntBASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01555Q8NAE3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
LINC01555Q8NAE3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LINC01555Q8NAE3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LINC01555Q8NAE3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 KRT16P6-202ENST00000425692 1426 ntBASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.26■□□□□ 0.67
LINC01555Q8NAE3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 AC069544.1-201ENST00000609399 999 ntBASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LINC01555Q8NAE3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 AC112907.3-201ENST00000577781 2400 ntBASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 KRT17P3-201ENST00000420566 1262 ntBASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 AL691432.2-201ENST00000607222 2038 ntBASIC19.24■□□□□ 0.67
LINC01555Q8NAE3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 PRORSD1P-201ENST00000295112 541 ntBASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01555Q8NAE3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms