Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN22Q8N7P3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN22Q8N7P3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLDN22Q8N7P3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN22Q8N7P3 AL356652.1-201ENST00000615962 565 ntBASIC18.19■□□□□ 0.5
CLDN22Q8N7P3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN22Q8N7P3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLDN22Q8N7P3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN22Q8N7P3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN22Q8N7P3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN22Q8N7P3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN22Q8N7P3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN22Q8N7P3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN22Q8N7P3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN22Q8N7P3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 AP000974.1-201ENST00000623909 2387 ntBASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN22Q8N7P3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 AC137761.2-201ENST00000561729 223 ntBASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 AC145350.3-201ENST00000569033 163 ntBASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 AC010536.3-201ENST00000620306 533 ntBASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN22Q8N7P3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 TREX1-205ENST00000625293 1783 ntBASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN22Q8N7P3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN22Q8N7P3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms