Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00311Q8N616 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00311Q8N616 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00311Q8N616 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00311Q8N616 AC112907.3-201ENST00000577781 2400 ntBASIC16.23■□□□□ 0.19
LINC00311Q8N616 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LINC00311Q8N616 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 AP001271.2-201ENST00000624018 1556 ntBASIC16.22■□□□□ 0.19
LINC00311Q8N616 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LINC00311Q8N616 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00311Q8N616 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00311Q8N616 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.22■□□□□ 0.19
LINC00311Q8N616 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00311Q8N616 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00311Q8N616 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00311Q8N616 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LINC00311Q8N616 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 HLA-B-256ENST00000639848 1089 ntBASIC16.22■□□□□ 0.19
LINC00311Q8N616 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
LINC00311Q8N616 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00311Q8N616 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00311Q8N616 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00311Q8N616 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LINC00311Q8N616 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC00311Q8N616 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LINC00311Q8N616 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LINC00311Q8N616 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.21■□□□□ 0.19
LINC00311Q8N616 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LINC00311Q8N616 AC069152.1-201ENST00000438030 544 ntBASIC16.21■□□□□ 0.19
LINC00311Q8N616 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LINC00311Q8N616 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC00311Q8N616 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.21■□□□□ 0.19
LINC00311Q8N616 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.21■□□□□ 0.19
LINC00311Q8N616 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC00311Q8N616 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00311Q8N616 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LINC00311Q8N616 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LINC00311Q8N616 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
LINC00311Q8N616 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00311Q8N616 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00311Q8N616 PHGDH-210ENST00000641115 1638 ntBASIC16.2■□□□□ 0.18
LINC00311Q8N616 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00311Q8N616 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00311Q8N616 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00311Q8N616 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00311Q8N616 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00311Q8N616 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00311Q8N616 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC00311Q8N616 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00311Q8N616 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00311Q8N616 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00311Q8N616 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00311Q8N616 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00311Q8N616 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00311Q8N616 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC00311Q8N616 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00311Q8N616 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LINC00311Q8N616 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
LINC00311Q8N616 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LINC00311Q8N616 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00311Q8N616 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00311Q8N616 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00311Q8N616 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00311Q8N616 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00311Q8N616 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00311Q8N616 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00311Q8N616 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.19■□□□□ 0.18
LINC00311Q8N616 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC00311Q8N616 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00311Q8N616 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00311Q8N616 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00311Q8N616 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00311Q8N616 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC00311Q8N616 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms