Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.89■□□□□ 0.61
ARHGEF39Q8N4T4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ARHGEF39Q8N4T4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 KRT16P6-202ENST00000425692 1426 ntBASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 AL359736.2-201ENST00000621992 437 ntBASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ARHGEF39Q8N4T4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 AC133681.1-201ENST00000465482 601 ntBASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 RPPH1-201ENST00000516869 333 ntBASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.86■□□□□ 0.61
ARHGEF39Q8N4T4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms