Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
DHX40Q8IX18 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DHX40Q8IX18 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
DHX40Q8IX18 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
DHX40Q8IX18 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
DHX40Q8IX18 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.2■■□□□ 1.14
DHX40Q8IX18 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.2■■□□□ 1.14
DHX40Q8IX18 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
DHX40Q8IX18 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
DHX40Q8IX18 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
DHX40Q8IX18 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DHX40Q8IX18 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.2■■□□□ 1.14
DHX40Q8IX18 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
DHX40Q8IX18 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
DHX40Q8IX18 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DHX40Q8IX18 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.19■■□□□ 1.14
DHX40Q8IX18 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DHX40Q8IX18 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.19■■□□□ 1.14
DHX40Q8IX18 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DHX40Q8IX18 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
DHX40Q8IX18 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
DHX40Q8IX18 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
DHX40Q8IX18 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DHX40Q8IX18 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.19■■□□□ 1.14
DHX40Q8IX18 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.19■■□□□ 1.14
DHX40Q8IX18 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.19■■□□□ 1.14
DHX40Q8IX18 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.19■■□□□ 1.14
DHX40Q8IX18 AC087633.2-202ENST00000565166 1439 ntBASIC22.19■■□□□ 1.14
DHX40Q8IX18 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
DHX40Q8IX18 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.19■■□□□ 1.14
DHX40Q8IX18 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
DHX40Q8IX18 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DHX40Q8IX18 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DHX40Q8IX18 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.19■■□□□ 1.14
DHX40Q8IX18 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
DHX40Q8IX18 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DHX40Q8IX18 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DHX40Q8IX18 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
DHX40Q8IX18 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
DHX40Q8IX18 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
DHX40Q8IX18 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DHX40Q8IX18 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DHX40Q8IX18 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.18■■□□□ 1.14
DHX40Q8IX18 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.18■■□□□ 1.14
DHX40Q8IX18 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DHX40Q8IX18 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DHX40Q8IX18 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DHX40Q8IX18 KRT18P5-201ENST00000436075 1291 ntBASIC22.18■■□□□ 1.14
DHX40Q8IX18 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DHX40Q8IX18 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
DHX40Q8IX18 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DHX40Q8IX18 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.18■■□□□ 1.14
DHX40Q8IX18 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DHX40Q8IX18 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.18■■□□□ 1.14
DHX40Q8IX18 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DHX40Q8IX18 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DHX40Q8IX18 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DHX40Q8IX18 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DHX40Q8IX18 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.17■■□□□ 1.14
DHX40Q8IX18 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DHX40Q8IX18 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
DHX40Q8IX18 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
DHX40Q8IX18 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DHX40Q8IX18 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
DHX40Q8IX18 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DHX40Q8IX18 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DHX40Q8IX18 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.17■■□□□ 1.14
DHX40Q8IX18 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.17■■□□□ 1.14
DHX40Q8IX18 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DHX40Q8IX18 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.17■■□□□ 1.14
DHX40Q8IX18 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DHX40Q8IX18 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.17■■□□□ 1.14
DHX40Q8IX18 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.17■■□□□ 1.14
DHX40Q8IX18 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.17■■□□□ 1.14
DHX40Q8IX18 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.17■■□□□ 1.14
DHX40Q8IX18 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.17■■□□□ 1.14
DHX40Q8IX18 CDV3P1-201ENST00000471403 739 ntBASIC22.17■■□□□ 1.14
DHX40Q8IX18 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DHX40Q8IX18 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC22.17■■□□□ 1.14
DHX40Q8IX18 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DHX40Q8IX18 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
DHX40Q8IX18 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
DHX40Q8IX18 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DHX40Q8IX18 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
DHX40Q8IX18 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.17■■□□□ 1.14
DHX40Q8IX18 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DHX40Q8IX18 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DHX40Q8IX18 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.16■■□□□ 1.14
DHX40Q8IX18 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.16■■□□□ 1.14
DHX40Q8IX18 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
DHX40Q8IX18 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DHX40Q8IX18 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
DHX40Q8IX18 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DHX40Q8IX18 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC22.16■■□□□ 1.14
DHX40Q8IX18 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DHX40Q8IX18 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DHX40Q8IX18 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.16■■□□□ 1.14
DHX40Q8IX18 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.16■■□□□ 1.14
DHX40Q8IX18 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.16■■□□□ 1.14
DHX40Q8IX18 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms