Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 Z82202.1-201ENST00000623446 1880 ntBASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 LETM1P2-201ENST00000597330 2178 ntBASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 AC012414.1-201ENST00000556676 535 ntBASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM42Q8IWZ5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM42Q8IWZ5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM42Q8IWZ5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM42Q8IWZ5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM42Q8IWZ5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM42Q8IWZ5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM42Q8IWZ5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM42Q8IWZ5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM42Q8IWZ5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM42Q8IWZ5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRIM42Q8IWZ5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRIM42Q8IWZ5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM42Q8IWZ5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM42Q8IWZ5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM42Q8IWZ5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 AC079140.4-201ENST00000507448 529 ntBASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 FAM21FP-204ENST00000608637 956 ntBASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM42Q8IWZ5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 TPRG1LP1-201ENST00000598702 760 ntBASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 AL358852.1-201ENST00000623174 1268 ntBASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM42Q8IWZ5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM42Q8IWZ5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms