Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.33■■□□□ 1.17
TRIM50Q86XT4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM50Q86XT4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.33■■□□□ 1.17
TRIM50Q86XT4 TSPY15P-201ENST00000457163 923 ntBASIC22.33■■□□□ 1.17
TRIM50Q86XT4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM50Q86XT4 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.33■■□□□ 1.17
TRIM50Q86XT4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.33■■□□□ 1.17
TRIM50Q86XT4 AL121906.2-201ENST00000621597 723 ntBASIC22.33■■□□□ 1.17
TRIM50Q86XT4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM50Q86XT4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.33■■□□□ 1.17
TRIM50Q86XT4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
TRIM50Q86XT4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRIM50Q86XT4 NBPF21P-201ENST00000425093 1451 ntBASIC22.33■■□□□ 1.16
TRIM50Q86XT4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRIM50Q86XT4 DPP3P2-201ENST00000416030 1696 ntBASIC22.33■■□□□ 1.16
TRIM50Q86XT4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 HLA-G-202ENST00000376815 851 ntBASIC22.32■■□□□ 1.16
TRIM50Q86XT4 HLA-G-203ENST00000376818 1127 ntBASIC22.32■■□□□ 1.16
TRIM50Q86XT4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM50Q86XT4 KRT8P20-201ENST00000423953 1409 ntBASIC22.31■■□□□ 1.16
TRIM50Q86XT4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.31■■□□□ 1.16
TRIM50Q86XT4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM50Q86XT4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
TRIM50Q86XT4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
TRIM50Q86XT4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.31■■□□□ 1.16
TRIM50Q86XT4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM50Q86XT4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.31■■□□□ 1.16
TRIM50Q86XT4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.31■■□□□ 1.16
TRIM50Q86XT4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.31■■□□□ 1.16
TRIM50Q86XT4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.31■■□□□ 1.16
TRIM50Q86XT4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM50Q86XT4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM50Q86XT4 AL135905.2-201ENST00000584934 1404 ntBASIC22.31■■□□□ 1.16
TRIM50Q86XT4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM50Q86XT4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
TRIM50Q86XT4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 AC007375.3-201ENST00000600936 2314 ntBASIC22.3■■□□□ 1.16
TRIM50Q86XT4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 AC073912.3-201ENST00000624414 853 ntBASIC22.3■■□□□ 1.16
TRIM50Q86XT4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM50Q86XT4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM50Q86XT4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.28■■□□□ 1.16
TRIM50Q86XT4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms