Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
ZNF546Q86UE3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF546Q86UE3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF546Q86UE3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF546Q86UE3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF546Q86UE3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.58■□□□□ 0.25
ZNF546Q86UE3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
ZNF546Q86UE3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 PCDHB18P-201ENST00000524813 2368 ntBASIC16.58■□□□□ 0.24
ZNF546Q86UE3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF546Q86UE3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 AC099791.2-201ENST00000605725 427 ntBASIC16.57■□□□□ 0.24
ZNF546Q86UE3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF546Q86UE3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 AL390961.4-201ENST00000623958 2535 ntBASIC16.56■□□□□ 0.24
ZNF546Q86UE3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 AC092171.4-201ENST00000609130 632 ntBASIC16.56■□□□□ 0.24
ZNF546Q86UE3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF546Q86UE3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms