Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 P4HB-212ENST00000478034 811 ntTSL 214.94□□□□□ -0.021e-23■■■□□ 15.5
SND1Q7KZF4 LAMB2-213ENST00000486298 590 ntTSL 414.2□□□□□ -0.149e-8■■■□□ 15.4
SND1Q7KZF4 DCAF7-202ENST00000431926 1354 ntTSL 1 (best)15.23■□□□□ 0.033e-7■■■□□ 15.4
SND1Q7KZF4 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.58□□□□□ -0.083e-7■■■□□ 15.4
SND1Q7KZF4 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.513e-7■■■□□ 15.4
SND1Q7KZF4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.54■□□□□ 0.886e-15■■■□□ 15.4
SND1Q7KZF4 RPS23-202ENST00000503605 595 ntTSL 317.63■□□□□ 0.416e-15■■■□□ 15.4
SND1Q7KZF4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.386e-15■■■□□ 15.4
SND1Q7KZF4 TMEM161A-212ENST00000591031 744 ntTSL 316.52■□□□□ 0.241e-11■■■□□ 15.4
SND1Q7KZF4 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.33□□□□□ -0.126e-15■■■□□ 15.4
SND1Q7KZF4 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC12.65□□□□□ -0.386e-15■■■□□ 15.4
SND1Q7KZF4 C14orf2-208ENST00000554713 1058 ntTSL 1 (best) BASIC12.21□□□□□ -0.456e-15■■■□□ 15.4
SND1Q7KZF4 C14orf2-212ENST00000557260 856 ntTSL 1 (best)10.56□□□□□ -0.726e-15■■■□□ 15.4
SND1Q7KZF4 RPS23-203ENST00000504293 576 ntTSL 1 (best)8.95□□□□□ -0.986e-15■■■□□ 15.4
SND1Q7KZF4 C14orf2-205ENST00000554089 932 ntTSL 1 (best)7.96□□□□□ -1.146e-15■■■□□ 15.4
SND1Q7KZF4 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.45□□□□□ -1.226e-15■■■□□ 15.4
SND1Q7KZF4 NCSTN-203ENST00000421914 776 ntTSL 414.06□□□□□ -0.166e-7■■■□□ 15.4
SND1Q7KZF4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.262e-7■■■□□ 15.4
SND1Q7KZF4 COL9A3-204ENST00000463487 760 ntTSL 520.63■□□□□ 0.891e-8■■■□□ 15.4
SND1Q7KZF4 LMAN2-204ENST00000504071 562 ntTSL 219■□□□□ 0.633e-8■■■□□ 15.4
SND1Q7KZF4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.97■□□□□ 0.151e-9■■■□□ 15.4
SND1Q7KZF4 ABCC6-203ENST00000574094 2260 ntTSL 515.7■□□□□ 0.11e-9■■■□□ 15.4
SND1Q7KZF4 ABCC6-202ENST00000456970 4137 ntTSL 215.31■□□□□ 0.041e-9■■■□□ 15.4
SND1Q7KZF4 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.011e-9■■■□□ 15.4
SND1Q7KZF4 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.821e-6■■■□□ 15.4
SND1Q7KZF4 ASAH1-235ENST00000636719 527 ntTSL 58.76□□□□□ -1.012e-10■■■□□ 15.4
SND1Q7KZF4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.21e-6■■■□□ 15.4
SND1Q7KZF4 XRCC5-206ENST00000460284 2962 ntTSL 1 (best)7.47□□□□□ -1.212e-11■■■□□ 15.4
SND1Q7KZF4 LMAN2-205ENST00000506310 564 ntTSL 414.76□□□□□ -0.052e-10■■■□□ 15.4
SND1Q7KZF4 TK1-206ENST00000592126 631 ntTSL 320.31■□□□□ 0.842e-15■■■□□ 15.4
SND1Q7KZF4 WARS-218ENST00000554772 562 ntTSL 319.43■□□□□ 0.71e-7■■■□□ 15.4
SND1Q7KZF4 WARS-236ENST00000556783 567 ntTSL 517.59■□□□□ 0.411e-7■■■□□ 15.4
SND1Q7KZF4 WARS-206ENST00000553413 568 ntTSL 516.92■□□□□ 0.31e-7■■■□□ 15.4
SND1Q7KZF4 WARS-231ENST00000556579 565 ntTSL 213.64□□□□□ -0.231e-7■■■□□ 15.4
SND1Q7KZF4 WARS-210ENST00000553769 560 ntTSL 413.11□□□□□ -0.311e-7■■■□□ 15.4
SND1Q7KZF4 WARS-208ENST00000553545 591 ntTSL 411.45□□□□□ -0.581e-7■■■□□ 15.4
SND1Q7KZF4 WARS-233ENST00000556660 584 ntTSL 410.78□□□□□ -0.681e-7■■■□□ 15.4
SND1Q7KZF4 WARS-219ENST00000554820 538 ntTSL 47.42□□□□□ -1.221e-7■■■□□ 15.4
SND1Q7KZF4 WARS-237ENST00000557094 582 ntTSL 26.89□□□□□ -1.311e-7■■■□□ 15.4
SND1Q7KZF4 WARS-223ENST00000555410 677 ntTSL 55.43□□□□□ -1.541e-7■■■□□ 15.4
SND1Q7KZF4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.292e-6■■■□□ 15.4
SND1Q7KZF4 SEC63-202ENST00000429168 647 ntTSL 59.82□□□□□ -0.842e-6■■■□□ 15.4
SND1Q7KZF4 SEC63-209ENST00000484803 724 ntTSL 29.82□□□□□ -0.842e-6■■■□□ 15.4
SND1Q7KZF4 MXRA8-205ENST00000464351 405 ntTSL 220.41■□□□□ 0.863e-8■■■□□ 15.4
SND1Q7KZF4 GGT1-221ENST00000452551 811 ntTSL 314.91□□□□□ -0.022e-8■■■□□ 15.4
SND1Q7KZF4 GGT1-219ENST00000447416 743 ntTSL 314.19□□□□□ -0.142e-8■■■□□ 15.4
SND1Q7KZF4 GGT1-209ENST00000411974 758 ntTSL 313.55□□□□□ -0.242e-8■■■□□ 15.4
SND1Q7KZF4 GGT1-214ENST00000428855 874 ntTSL 313.55□□□□□ -0.242e-8■■■□□ 15.4
SND1Q7KZF4 GGT1-225ENST00000474191 535 ntTSL 512.75□□□□□ -0.372e-8■■■□□ 15.4
SND1Q7KZF4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.65□□□□□ -0.063e-6■■■□□ 15.4
SND1Q7KZF4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.063e-6■■■□□ 15.4
SND1Q7KZF4 PHGDH-207ENST00000496756 508 ntTSL 213.58□□□□□ -0.247e-8■■■□□ 15.4
SND1Q7KZF4 SAT1-209ENST00000489394 1135 ntTSL 211.46□□□□□ -0.573e-6■■■□□ 15.4
SND1Q7KZF4 PHGDH-219ENST00000641513 735 nt9.31□□□□□ -0.927e-8■■■□□ 15.4
SND1Q7KZF4 SAT1-206ENST00000463236 735 ntTSL 36.45□□□□□ -1.383e-6■■■□□ 15.4
SND1Q7KZF4 DDB1-221ENST00000543162 575 ntTSL 411.13□□□□□ -0.633e-7■■■□□ 15.4
SND1Q7KZF4 UXS1-208ENST00000457835 682 ntTSL 419.05■□□□□ 0.649e-9■■■□□ 15.4
SND1Q7KZF4 UXS1-205ENST00000436241 502 ntTSL 412.63□□□□□ -0.399e-9■■■□□ 15.4
SND1Q7KZF4 UXS1-204ENST00000416298 701 ntTSL 511.97□□□□□ -0.499e-9■■■□□ 15.4
SND1Q7KZF4 UXS1-207ENST00000444193 800 ntTSL 311.06□□□□□ -0.649e-9■■■□□ 15.4
SND1Q7KZF4 AZGP1-206ENST00000495765 540 ntTSL 26.81□□□□□ -1.323e-8■■■□□ 15.4
SND1Q7KZF4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.575e-7■■■□□ 15.4
SND1Q7KZF4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.465e-7■■■□□ 15.4
SND1Q7KZF4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.96■□□□□ 0.35e-7■■■□□ 15.4
SND1Q7KZF4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.151e-9■■■□□ 15.4
SND1Q7KZF4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.01■□□□□ 0.151e-9■■■□□ 15.4
SND1Q7KZF4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.78■□□□□ 0.122e-10■■■□□ 15.4
SND1Q7KZF4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.39□□□□□ -0.115e-7■■■□□ 15.4
SND1Q7KZF4 PSMB6-202ENST00000571309 583 ntTSL 314.19□□□□□ -0.141e-9■■■□□ 15.4
SND1Q7KZF4 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC13.84□□□□□ -0.195e-7■■■□□ 15.4
SND1Q7KZF4 PSMB6-204ENST00000575643 666 ntTSL 213.59□□□□□ -0.231e-9■■■□□ 15.4
SND1Q7KZF4 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.345e-7■■■□□ 15.4
SND1Q7KZF4 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.022e-10■■■□□ 15.4
SND1Q7KZF4 CPQ-207ENST00000525310 568 ntTSL 29.21□□□□□ -0.944e-7■■■□□ 15.4
SND1Q7KZF4 CPQ-203ENST00000519484 553 ntTSL 48.47□□□□□ -1.054e-7■■■□□ 15.4
SND1Q7KZF4 CPQ-202ENST00000517742 660 ntTSL 57.92□□□□□ -1.144e-7■■■□□ 15.4
SND1Q7KZF4 CPQ-204ENST00000519900 566 ntTSL 47.17□□□□□ -1.264e-7■■■□□ 15.4
SND1Q7KZF4 LMF2-205ENST00000507607 605 ntTSL 219.46■□□□□ 0.712e-7■■■□□ 15.4
SND1Q7KZF4 TUFM-202ENST00000561644 294 ntTSL 220.63■□□□□ 0.899e-13■■■□□ 15.4
SND1Q7KZF4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.69■□□□□ 0.97e-8■■■□□ 15.4
SND1Q7KZF4 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC9.04□□□□□ -0.967e-8■■■□□ 15.4
SND1Q7KZF4 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.17e-8■■■□□ 15.4
SND1Q7KZF4 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC8.12□□□□□ -1.117e-8■■■□□ 15.4
SND1Q7KZF4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.5□□□□□ -1.537e-8■■■□□ 15.4
SND1Q7KZF4 IL17RB-201ENST00000288167 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.347e-8■■■□□ 15.4
SND1Q7KZF4 IL17RB-203ENST00000494338 1048 ntTSL 512.42□□□□□ -0.427e-8■■■□□ 15.4
SND1Q7KZF4 IL17RB-202ENST00000475124 2822 ntTSL 210.29□□□□□ -0.767e-8■■■□□ 15.4
SND1Q7KZF4 OSTC-203ENST00000510556 331 ntTSL 57.8□□□□□ -1.162e-11■■■□□ 15.3
SND1Q7KZF4 TF-212ENST00000493011 999 ntTSL 219.57■□□□□ 0.721e-19■■■□□ 15.3
SND1Q7KZF4 RNASET2-212ENST00000510083 2280 ntTSL 217.27■□□□□ 0.354e-9■■■□□ 15.3
SND1Q7KZF4 OS9-208ENST00000546916 1028 ntTSL 221.04■□□□□ 0.963e-9■■■□□ 15.3
SND1Q7KZF4 HYAL1-205ENST00000418723 567 ntTSL 412.92□□□□□ -0.343e-9■■■□□ 15.3
SND1Q7KZF4 ATP2A2-203ENST00000377685 5702 ntTSL 524.1■■□□□ 1.452e-7■■■□□ 15.3
SND1Q7KZF4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.862e-7■■■□□ 15.3
SND1Q7KZF4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.412e-7■■■□□ 15.3
SND1Q7KZF4 ATP2A2-207ENST00000548169 2951 ntTSL 211.4□□□□□ -0.582e-7■■■□□ 15.3
SND1Q7KZF4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.19■□□□□ 0.664e-6■■■□□ 15.3
SND1Q7KZF4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.53■□□□□ 0.44e-6■■■□□ 15.3
SND1Q7KZF4 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.94□□□□□ -1.34e-6■■■□□ 15.3
SND1Q7KZF4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.726e-7■■■□□ 15.3
Retrieved 100 of 13,567 protein–RNA pairs in 172 ms