Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 EGLN1P1-201ENST00000531623 762 ntBASIC21.61■■□□□ 1.05
CNKSR3Q6P9H4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.61■■□□□ 1.05
CNKSR3Q6P9H4 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.61■■□□□ 1.05
CNKSR3Q6P9H4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CNKSR3Q6P9H4 AL049796.1-201ENST00000565336 1766 ntBASIC21.61■■□□□ 1.05
CNKSR3Q6P9H4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.61■■□□□ 1.05
CNKSR3Q6P9H4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 B3GAT3P1-201ENST00000471720 806 ntBASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.6■■□□□ 1.05
CNKSR3Q6P9H4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 TSPY14P-201ENST00000303979 915 ntBASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 WWOX-216ENST00000569818 525 ntBASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 AC006011.2-201ENST00000621313 1158 ntBASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNKSR3Q6P9H4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CNKSR3Q6P9H4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.58■■□□□ 1.05
CNKSR3Q6P9H4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNKSR3Q6P9H4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CNKSR3Q6P9H4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNKSR3Q6P9H4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CNKSR3Q6P9H4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNKSR3Q6P9H4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CNKSR3Q6P9H4 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.58■■□□□ 1.04
CNKSR3Q6P9H4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNKSR3Q6P9H4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CNKSR3Q6P9H4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.58■■□□□ 1.04
CNKSR3Q6P9H4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CNKSR3Q6P9H4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.58■■□□□ 1.04
CNKSR3Q6P9H4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 ECEL1P2-202ENST00000465689 757 ntBASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNKSR3Q6P9H4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 AC011506.1-201ENST00000474329 610 ntBASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 AC128688.1-201ENST00000487626 519 ntBASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms