Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 AC022517.1-201ENST00000592429 346 ntBASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 AL137784.2-201ENST00000607332 1000 ntBASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 IKBKGP1-201ENST00000612193 1073 ntBASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 AC055733.4-201ENST00000638462 1354 ntBASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.09■□□□□ 0.65
PPP4R4Q6NUP7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PPP4R4Q6NUP7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PPP4R4Q6NUP7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PPP4R4Q6NUP7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PPP4R4Q6NUP7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
PPP4R4Q6NUP7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PPP4R4Q6NUP7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PPP4R4Q6NUP7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PPP4R4Q6NUP7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PPP4R4Q6NUP7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 AC104187.1-201ENST00000607510 612 ntBASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R4Q6NUP7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 KRT19P1-201ENST00000405746 1186 ntBASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 AP004607.4-201ENST00000530158 1459 ntBASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
PPP4R4Q6NUP7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.06■□□□□ 0.64
PPP4R4Q6NUP7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms