Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTL6Q6ICC9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.03■□□□□ 0.48
RTL6Q6ICC9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.03■□□□□ 0.48
RTL6Q6ICC9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.03■□□□□ 0.48
RTL6Q6ICC9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.03■□□□□ 0.48
RTL6Q6ICC9 MIR2861-201ENST00000636310 90 ntBASIC18.03■□□□□ 0.48
RTL6Q6ICC9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.03■□□□□ 0.48
RTL6Q6ICC9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL6Q6ICC9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL6Q6ICC9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTL6Q6ICC9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.03■□□□□ 0.48
RTL6Q6ICC9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL6Q6ICC9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL6Q6ICC9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTL6Q6ICC9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 SNORA78-201ENST00000459373 127 ntBASIC18.02■□□□□ 0.48
RTL6Q6ICC9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 KRT8P36-201ENST00000489121 1440 ntBASIC18.02■□□□□ 0.48
RTL6Q6ICC9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTL6Q6ICC9 AF106564.1-201ENST00000607058 2553 ntBASIC18.02■□□□□ 0.47
RTL6Q6ICC9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.02■□□□□ 0.47
RTL6Q6ICC9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RTL6Q6ICC9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.02■□□□□ 0.47
RTL6Q6ICC9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTL6Q6ICC9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTL6Q6ICC9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 AC239809.2-201ENST00000415381 517 ntBASIC18.01■□□□□ 0.47
RTL6Q6ICC9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 AL049796.1-201ENST00000565336 1766 ntBASIC18.01■□□□□ 0.47
RTL6Q6ICC9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTL6Q6ICC9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18■□□□□ 0.47
RTL6Q6ICC9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18■□□□□ 0.47
RTL6Q6ICC9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RTL6Q6ICC9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RTL6Q6ICC9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
RTL6Q6ICC9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18■□□□□ 0.47
RTL6Q6ICC9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18■□□□□ 0.47
RTL6Q6ICC9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18■□□□□ 0.47
RTL6Q6ICC9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
RTL6Q6ICC9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RTL6Q6ICC9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RTL6Q6ICC9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms