Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17■□□□□ 0.31
ARFGEF3Q5TH69 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17■□□□□ 0.31
ARFGEF3Q5TH69 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ARFGEF3Q5TH69 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17■□□□□ 0.31
ARFGEF3Q5TH69 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARFGEF3Q5TH69 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ARFGEF3Q5TH69 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARFGEF3Q5TH69 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17■□□□□ 0.31
ARFGEF3Q5TH69 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARFGEF3Q5TH69 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARFGEF3Q5TH69 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 SNORA78-201ENST00000459373 127 ntBASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 AC007225.1-201ENST00000566331 1836 ntBASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 AL135905.2-201ENST00000584934 1404 ntBASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 NBPF21P-201ENST00000425093 1451 ntBASIC16.99■□□□□ 0.31
ARFGEF3Q5TH69 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 AC233702.5-201ENST00000584107 538 ntBASIC16.98■□□□□ 0.31
ARFGEF3Q5TH69 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ARFGEF3Q5TH69 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 AL031963.3-201ENST00000606441 850 ntBASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 KRT16P5-201ENST00000455284 522 ntBASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ARFGEF3Q5TH69 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms