Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC32.92■■■□□ 2.86
SNAPC4Q5SXM2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC32.92■■■□□ 2.86
SNAPC4Q5SXM2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SNAPC4Q5SXM2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SNAPC4Q5SXM2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC32.91■■■□□ 2.86
SNAPC4Q5SXM2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
SNAPC4Q5SXM2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC32.91■■■□□ 2.86
SNAPC4Q5SXM2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC32.91■■■□□ 2.86
SNAPC4Q5SXM2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC32.91■■■□□ 2.86
SNAPC4Q5SXM2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
SNAPC4Q5SXM2 C9orf163-202ENST00000624034 2573 ntBASIC32.91■■■□□ 2.86
SNAPC4Q5SXM2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 AC011484.1-201ENST00000377652 1995 ntBASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 AC116407.4-201ENST00000623319 1061 ntBASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 AC005332.1-201ENST00000577698 1310 ntBASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
SNAPC4Q5SXM2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
SNAPC4Q5SXM2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
SNAPC4Q5SXM2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC32.89■■■□□ 2.86
SNAPC4Q5SXM2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC32.89■■■□□ 2.86
SNAPC4Q5SXM2 COX11P1-201ENST00000489116 835 ntBASIC32.89■■■□□ 2.86
SNAPC4Q5SXM2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
SNAPC4Q5SXM2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC32.89■■■□□ 2.86
SNAPC4Q5SXM2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
SNAPC4Q5SXM2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC32.89■■■□□ 2.86
SNAPC4Q5SXM2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC32.88■■■□□ 2.85
SNAPC4Q5SXM2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC32.88■■■□□ 2.85
SNAPC4Q5SXM2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC32.88■■■□□ 2.85
SNAPC4Q5SXM2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC32.88■■■□□ 2.85
SNAPC4Q5SXM2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC32.88■■■□□ 2.85
SNAPC4Q5SXM2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
SNAPC4Q5SXM2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC32.88■■■□□ 2.85
SNAPC4Q5SXM2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC32.88■■■□□ 2.85
SNAPC4Q5SXM2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC32.88■■■□□ 2.85
SNAPC4Q5SXM2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
SNAPC4Q5SXM2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC32.87■■■□□ 2.85
SNAPC4Q5SXM2 AC012313.10-201ENST00000623509 926 ntBASIC32.87■■■□□ 2.85
SNAPC4Q5SXM2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC32.87■■■□□ 2.85
SNAPC4Q5SXM2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC32.87■■■□□ 2.85
SNAPC4Q5SXM2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC32.87■■■□□ 2.85
SNAPC4Q5SXM2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
SNAPC4Q5SXM2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
SNAPC4Q5SXM2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
SNAPC4Q5SXM2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 ANKRD20A18P-201ENST00000359341 492 ntBASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 AC096733.2-201ENST00000609937 1394 ntBASIC32.86■■■□□ 2.85
SNAPC4Q5SXM2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC32.85■■■□□ 2.85
SNAPC4Q5SXM2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC32.85■■■□□ 2.85
SNAPC4Q5SXM2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC32.85■■■□□ 2.85
SNAPC4Q5SXM2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC32.85■■■□□ 2.85
SNAPC4Q5SXM2 AC069148.1-201ENST00000608741 768 ntBASIC32.85■■■□□ 2.85
SNAPC4Q5SXM2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC32.85■■■□□ 2.85
SNAPC4Q5SXM2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC32.85■■■□□ 2.85
SNAPC4Q5SXM2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
SNAPC4Q5SXM2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC32.84■■■□□ 2.85
SNAPC4Q5SXM2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC32.84■■■□□ 2.85
SNAPC4Q5SXM2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC32.84■■■□□ 2.85
SNAPC4Q5SXM2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
SNAPC4Q5SXM2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC32.84■■■□□ 2.85
SNAPC4Q5SXM2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
SNAPC4Q5SXM2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SNAPC4Q5SXM2 AL359075.1-203ENST00000462729 1002 ntBASIC32.84■■■□□ 2.85
SNAPC4Q5SXM2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
SNAPC4Q5SXM2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SNAPC4Q5SXM2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC32.84■■■□□ 2.85
SNAPC4Q5SXM2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SNAPC4Q5SXM2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 RCC2P6-201ENST00000526625 1557 ntBASIC32.83■■■□□ 2.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms