Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRK2Q5S007 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRK2Q5S007 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRK2Q5S007 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRK2Q5S007 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRK2Q5S007 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRK2Q5S007 AL845331.1-201ENST00000424978 1190 ntBASIC17.48■□□□□ 0.39
LRRK2Q5S007 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRK2Q5S007 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.48■□□□□ 0.39
LRRK2Q5S007 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRK2Q5S007 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRK2Q5S007 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRK2Q5S007 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRK2Q5S007 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRK2Q5S007 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRK2Q5S007 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRK2Q5S007 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
LRRK2Q5S007 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
LRRK2Q5S007 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRK2Q5S007 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.47■□□□□ 0.39
LRRK2Q5S007 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRK2Q5S007 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRK2Q5S007 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRK2Q5S007 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRK2Q5S007 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRK2Q5S007 AC083849.1-201ENST00000615227 514 ntBASIC17.47■□□□□ 0.39
LRRK2Q5S007 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRK2Q5S007 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRK2Q5S007 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRK2Q5S007 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
LRRK2Q5S007 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRK2Q5S007 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRK2Q5S007 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
LRRK2Q5S007 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.46■□□□□ 0.39
LRRK2Q5S007 SLC25A1P2-201ENST00000430693 912 ntBASIC17.46■□□□□ 0.39
LRRK2Q5S007 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.46■□□□□ 0.39
LRRK2Q5S007 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
LRRK2Q5S007 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.46■□□□□ 0.39
LRRK2Q5S007 AC096733.2-201ENST00000609937 1394 ntBASIC17.46■□□□□ 0.39
LRRK2Q5S007 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LRRK2Q5S007 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.46■□□□□ 0.38
LRRK2Q5S007 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
LRRK2Q5S007 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.46■□□□□ 0.38
LRRK2Q5S007 AL512604.3-201ENST00000569583 964 ntBASIC17.46■□□□□ 0.38
LRRK2Q5S007 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRK2Q5S007 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRK2Q5S007 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
LRRK2Q5S007 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRK2Q5S007 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRK2Q5S007 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRK2Q5S007 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRK2Q5S007 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRK2Q5S007 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRK2Q5S007 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LRRK2Q5S007 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
LRRK2Q5S007 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.45■□□□□ 0.38
LRRK2Q5S007 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRRK2Q5S007 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRK2Q5S007 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRK2Q5S007 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRK2Q5S007 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LRRK2Q5S007 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRRK2Q5S007 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRRK2Q5S007 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.45■□□□□ 0.38
LRRK2Q5S007 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRK2Q5S007 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.45■□□□□ 0.38
LRRK2Q5S007 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.45■□□□□ 0.38
LRRK2Q5S007 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.45■□□□□ 0.38
LRRK2Q5S007 AC116562.4-202ENST00000641738 218 ntBASIC17.45■□□□□ 0.38
LRRK2Q5S007 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRRK2Q5S007 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LRRK2Q5S007 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LRRK2Q5S007 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LRRK2Q5S007 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LRRK2Q5S007 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LRRK2Q5S007 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.44■□□□□ 0.38
LRRK2Q5S007 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
LRRK2Q5S007 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.44■□□□□ 0.38
LRRK2Q5S007 AL136038.3-201ENST00000561909 1096 ntBASIC17.44■□□□□ 0.38
LRRK2Q5S007 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.44■□□□□ 0.38
LRRK2Q5S007 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRK2Q5S007 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.44■□□□□ 0.38
LRRK2Q5S007 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRRK2Q5S007 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRK2Q5S007 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRRK2Q5S007 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms