Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.56■□□□□ 0.88
ALFQ53S48 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALFQ53S48 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALFQ53S48 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.56■□□□□ 0.88
ALFQ53S48 AC233263.1-201ENST00000578059 224 ntBASIC20.56■□□□□ 0.88
ALFQ53S48 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.56■□□□□ 0.88
ALFQ53S48 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALFQ53S48 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.56■□□□□ 0.88
ALFQ53S48 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
ALFQ53S48 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ALFQ53S48 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALFQ53S48 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ALFQ53S48 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALFQ53S48 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ALFQ53S48 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ALFQ53S48 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ALFQ53S48 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALFQ53S48 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALFQ53S48 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.55■□□□□ 0.88
ALFQ53S48 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.55■□□□□ 0.88
ALFQ53S48 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ALFQ53S48 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALFQ53S48 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALFQ53S48 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALFQ53S48 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALFQ53S48 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALFQ53S48 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALFQ53S48 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALFQ53S48 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.55■□□□□ 0.88
ALFQ53S48 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.55■□□□□ 0.88
ALFQ53S48 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALFQ53S48 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ALFQ53S48 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.54■□□□□ 0.88
ALFQ53S48 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALFQ53S48 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALFQ53S48 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.54■□□□□ 0.88
ALFQ53S48 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALFQ53S48 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALFQ53S48 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.54■□□□□ 0.88
ALFQ53S48 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ALFQ53S48 POM121L13P-201ENST00000422362 380 ntBASIC20.54■□□□□ 0.88
ALFQ53S48 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALFQ53S48 AC128676.1-201ENST00000454392 318 ntBASIC20.54■□□□□ 0.88
ALFQ53S48 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.54■□□□□ 0.88
ALFQ53S48 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.54■□□□□ 0.88
ALFQ53S48 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.54■□□□□ 0.88
ALFQ53S48 ITM2C-210ENST00000620962 501 ntBASIC20.54■□□□□ 0.88
ALFQ53S48 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.54■□□□□ 0.88
ALFQ53S48 AC073648.6-201ENST00000641589 218 ntBASIC20.54■□□□□ 0.88
ALFQ53S48 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.54■□□□□ 0.88
ALFQ53S48 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALFQ53S48 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALFQ53S48 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALFQ53S48 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALFQ53S48 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALFQ53S48 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALFQ53S48 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALFQ53S48 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALFQ53S48 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ALFQ53S48 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ALFQ53S48 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALFQ53S48 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALFQ53S48 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ALFQ53S48 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALFQ53S48 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALFQ53S48 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.53■□□□□ 0.88
ALFQ53S48 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALFQ53S48 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
ALFQ53S48 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALFQ53S48 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALFQ53S48 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ALFQ53S48 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ALFQ53S48 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ALFQ53S48 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALFQ53S48 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ALFQ53S48 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.53■□□□□ 0.88
ALFQ53S48 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALFQ53S48 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ALFQ53S48 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ALFQ53S48 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ALFQ53S48 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ALFQ53S48 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.52■□□□□ 0.88
ALFQ53S48 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ALFQ53S48 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
ALFQ53S48 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ALFQ53S48 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.52■□□□□ 0.88
ALFQ53S48 BX119927.1-201ENST00000636596 1552 ntBASIC20.52■□□□□ 0.88
ALFQ53S48 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ALFQ53S48 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
ALFQ53S48 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.52■□□□□ 0.88
ALFQ53S48 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ALFQ53S48 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ALFQ53S48 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.52■□□□□ 0.88
ALFQ53S48 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ALFQ53S48 RPS2P52-201ENST00000469610 820 ntBASIC20.52■□□□□ 0.88
ALFQ53S48 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.52■□□□□ 0.88
ALFQ53S48 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.52■□□□□ 0.88
ALFQ53S48 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.52■□□□□ 0.88
ALFQ53S48 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ALFQ53S48 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms