Protein–RNA interactions for Protein: Q3MHD2

LSM12, Protein LSM12 homolog, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12Q3MHD2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 Z82202.1-201ENST00000623446 1880 ntBASIC19.41■□□□□ 0.7
LSM12Q3MHD2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.41■□□□□ 0.7
LSM12Q3MHD2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LSM12Q3MHD2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LSM12Q3MHD2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LSM12Q3MHD2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LSM12Q3MHD2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.39■□□□□ 0.69
LSM12Q3MHD2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSM12Q3MHD2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM12Q3MHD2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM12Q3MHD2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM12Q3MHD2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.39■□□□□ 0.69
LSM12Q3MHD2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM12Q3MHD2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.39■□□□□ 0.69
LSM12Q3MHD2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.39■□□□□ 0.69
LSM12Q3MHD2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
LSM12Q3MHD2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSM12Q3MHD2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LSM12Q3MHD2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LSM12Q3MHD2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LSM12Q3MHD2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.38■□□□□ 0.69
LSM12Q3MHD2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 ZNRF2P3-201ENST00000424200 374 ntBASIC19.38■□□□□ 0.69
LSM12Q3MHD2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LSM12Q3MHD2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSM12Q3MHD2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM12Q3MHD2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.37■□□□□ 0.69
LSM12Q3MHD2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM12Q3MHD2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM12Q3MHD2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.37■□□□□ 0.69
LSM12Q3MHD2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LSM12Q3MHD2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSM12Q3MHD2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM12Q3MHD2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM12Q3MHD2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSM12Q3MHD2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSM12Q3MHD2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms