Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCGF3Q3KNV8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
PCGF3Q3KNV8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCGF3Q3KNV8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCGF3Q3KNV8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCGF3Q3KNV8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 AL512625.2-201ENST00000417533 625 ntBASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 AC105036.2-201ENST00000569468 176 ntBASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCGF3Q3KNV8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCGF3Q3KNV8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 AC091799.1-201ENST00000422823 811 ntBASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 TSPY6P-201ENST00000448518 926 ntBASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCGF3Q3KNV8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 RARRES2P4-201ENST00000514074 484 ntBASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 FAM21FP-204ENST00000608637 956 ntBASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCGF3Q3KNV8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms