Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB3Q15768 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
EFNB3Q15768 KRT8P17-201ENST00000453110 1448 ntBASIC17.06■□□□□ 0.32
EFNB3Q15768 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB3Q15768 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.06■□□□□ 0.32
EFNB3Q15768 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.06■□□□□ 0.32
EFNB3Q15768 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
EFNB3Q15768 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB3Q15768 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB3Q15768 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
EFNB3Q15768 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB3Q15768 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB3Q15768 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.06■□□□□ 0.32
EFNB3Q15768 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.06■□□□□ 0.32
EFNB3Q15768 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB3Q15768 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB3Q15768 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
EFNB3Q15768 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB3Q15768 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
EFNB3Q15768 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
EFNB3Q15768 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.06■□□□□ 0.32
EFNB3Q15768 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNB3Q15768 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.05■□□□□ 0.32
EFNB3Q15768 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
EFNB3Q15768 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
EFNB3Q15768 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
EFNB3Q15768 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
EFNB3Q15768 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNB3Q15768 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.05■□□□□ 0.32
EFNB3Q15768 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNB3Q15768 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.05■□□□□ 0.32
EFNB3Q15768 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNB3Q15768 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
EFNB3Q15768 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.05■□□□□ 0.32
EFNB3Q15768 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
EFNB3Q15768 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
EFNB3Q15768 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.05■□□□□ 0.32
EFNB3Q15768 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.05■□□□□ 0.32
EFNB3Q15768 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.05■□□□□ 0.32
EFNB3Q15768 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.05■□□□□ 0.32
EFNB3Q15768 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.05■□□□□ 0.32
EFNB3Q15768 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNB3Q15768 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EFNB3Q15768 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNB3Q15768 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.05■□□□□ 0.32
EFNB3Q15768 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.04■□□□□ 0.32
EFNB3Q15768 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EFNB3Q15768 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNB3Q15768 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNB3Q15768 AC092720.2-201ENST00000602388 1665 ntBASIC17.04■□□□□ 0.32
EFNB3Q15768 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNB3Q15768 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
EFNB3Q15768 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
EFNB3Q15768 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNB3Q15768 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.04■□□□□ 0.32
EFNB3Q15768 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EFNB3Q15768 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.04■□□□□ 0.32
EFNB3Q15768 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EFNB3Q15768 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.04■□□□□ 0.32
EFNB3Q15768 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNB3Q15768 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNB3Q15768 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.04■□□□□ 0.32
EFNB3Q15768 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
EFNB3Q15768 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
EFNB3Q15768 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
EFNB3Q15768 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EFNB3Q15768 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNB3Q15768 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNB3Q15768 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.04■□□□□ 0.32
EFNB3Q15768 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNB3Q15768 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EFNB3Q15768 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.03■□□□□ 0.32
EFNB3Q15768 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.03■□□□□ 0.32
EFNB3Q15768 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
EFNB3Q15768 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
EFNB3Q15768 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EFNB3Q15768 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
EFNB3Q15768 AC012618.2-201ENST00000428058 849 ntBASIC17.03■□□□□ 0.32
EFNB3Q15768 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.03■□□□□ 0.32
EFNB3Q15768 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.03■□□□□ 0.32
EFNB3Q15768 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
EFNB3Q15768 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.03■□□□□ 0.32
EFNB3Q15768 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.03■□□□□ 0.32
EFNB3Q15768 DPP3P2-201ENST00000416030 1696 ntBASIC17.03■□□□□ 0.32
EFNB3Q15768 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EFNB3Q15768 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.03■□□□□ 0.32
EFNB3Q15768 AL135905.2-201ENST00000584934 1404 ntBASIC17.03■□□□□ 0.32
EFNB3Q15768 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EFNB3Q15768 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.03■□□□□ 0.32
EFNB3Q15768 AC073130.3-201ENST00000624389 2278 ntBASIC17.03■□□□□ 0.32
EFNB3Q15768 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EFNB3Q15768 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EFNB3Q15768 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.02■□□□□ 0.32
EFNB3Q15768 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.02■□□□□ 0.32
EFNB3Q15768 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
EFNB3Q15768 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
EFNB3Q15768 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
EFNB3Q15768 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EFNB3Q15768 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.02■□□□□ 0.32
EFNB3Q15768 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms