Protein–RNA interactions for Protein: Q08417

RSB1, Sphingoid long-chain base transporter RSB1, yeastyeast

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSB1Q08417 YOR093CYOR093C 4947 nt1.74□□□□□ -2.13
RSB1Q08417 FYV10YIL097W 1551 nt1.74□□□□□ -2.13
RSB1Q08417 YMR045CYMR045C 5268 nt1.74□□□□□ -2.13
RSB1Q08417 STO1YMR125W 2586 nt1.73□□□□□ -2.13
RSB1Q08417 snR81snR81 201 nt1.73□□□□□ -2.13
RSB1Q08417 tT(UGU)HtT(UGU)H 72 nt1.73□□□□□ -2.13
RSB1Q08417 YMR247W-AYMR247W-A 144 nt1.73□□□□□ -2.13
RSB1Q08417 SEC21YNL287W 2808 nt1.73□□□□□ -2.13
RSB1Q08417 YLR232WYLR232W 348 nt1.72□□□□□ -2.13
RSB1Q08417 PKH3YDR466W 2697 nt1.72□□□□□ -2.13
RSB1Q08417 BPH1YCR032W 6504 nt1.71□□□□□ -2.14
RSB1Q08417 snR190snR190 190 nt1.71□□□□□ -2.14
RSB1Q08417 CDC25YLR310C 4770 nt1.7□□□□□ -2.14
RSB1Q08417 BIR1YJR089W 2865 nt1.7□□□□□ -2.14
RSB1Q08417 APL3YBL037W 3078 nt1.69□□□□□ -2.14
RSB1Q08417 NUP192YJL039C 5052 nt1.69□□□□□ -2.14
RSB1Q08417 CFT1YDR301W 4074 nt1.69□□□□□ -2.14
RSB1Q08417 SWI4YER111C 3282 nt1.69□□□□□ -2.14
RSB1Q08417 RPL26BYGR034W 384 nt1.68□□□□□ -2.14
RSB1Q08417 YLL066W-BYLL066W-B 171 nt1.68□□□□□ -2.14
RSB1Q08417 WAR1YML076C 2835 nt1.68□□□□□ -2.14
RSB1Q08417 SEC1YDR164C 2175 nt1.67□□□□□ -2.14
RSB1Q08417 YGR146C-AYGR146C-A 162 nt1.67□□□□□ -2.14
RSB1Q08417 YJL127W-AYJL127W-A 117 nt1.66□□□□□ -2.14
RSB1Q08417 YAL037C-AYAL037C-A 93 nt1.66□□□□□ -2.14
RSB1Q08417 snR45snR45 172 nt1.66□□□□□ -2.14
RSB1Q08417 YNL266WYNL266W 420 nt1.65□□□□□ -2.15
RSB1Q08417 YBR072C-AYBR072C-A 162 nt1.65□□□□□ -2.15
RSB1Q08417 DNF3YMR162C 4971 nt1.64□□□□□ -2.15
RSB1Q08417 SMC1YFL008W 3678 nt1.64□□□□□ -2.15
RSB1Q08417 PRP16YKR086W 3216 nt1.63□□□□□ -2.15
RSB1Q08417 VPS15YBR097W 4365 nt1.62□□□□□ -2.15
RSB1Q08417 BRR2YER172C 6492 nt1.62□□□□□ -2.15
RSB1Q08417 MSH3YCR092C 3057 nt1.61□□□□□ -2.15
RSB1Q08417 PMD1YER132C 5262 nt1.61□□□□□ -2.15
RSB1Q08417 CDC39YCR093W 6327 nt1.61□□□□□ -2.15
RSB1Q08417 YPL060C-AYPL060C-A 3315 nt1.6□□□□□ -2.15
RSB1Q08417 BST1YFL025C 3090 nt1.6□□□□□ -2.15
RSB1Q08417 CHS1YNL192W 3396 nt1.6□□□□□ -2.15
RSB1Q08417 IRA1YBR140C 9279 nt1.59□□□□□ -2.15
RSB1Q08417 NUP145YGL092W 3954 nt1.59□□□□□ -2.15
RSB1Q08417 NUP188YML103C 4968 nt1.58□□□□□ -2.16
RSB1Q08417 YBR200W-AYBR200W-A 165 nt1.58□□□□□ -2.16
RSB1Q08417 snR62snR62 100 nt1.56□□□□□ -2.16
RSB1Q08417 GEA2YEL022W 4380 nt1.56□□□□□ -2.16
RSB1Q08417 SEC8YPR055W 3198 nt1.55□□□□□ -2.16
RSB1Q08417 CAT8YMR280C 4302 nt1.55□□□□□ -2.16
RSB1Q08417 MEC1YBR136W 7107 nt1.54□□□□□ -2.16
RSB1Q08417 AZF1YOR113W 2745 nt1.53□□□□□ -2.16
RSB1Q08417 MSN5YDR335W 3675 nt1.53□□□□□ -2.16
RSB1Q08417 NNF2YGR089W 2811 nt1.53□□□□□ -2.16
RSB1Q08417 EST2YLR318W 2655 nt1.52□□□□□ -2.17
RSB1Q08417 tN(GUU)QtN(GUU)Q 71 nt1.52□□□□□ -2.17
RSB1Q08417 YBL071C-BYBL071C-B 99 nt1.52□□□□□ -2.17
RSB1Q08417 YPR160W-AYPR160W-A 81 nt1.52□□□□□ -2.17
RSB1Q08417 CLU1YMR012W 3834 nt1.52□□□□□ -2.17
RSB1Q08417 YLR399W-AYLR399W-A 105 nt1.51□□□□□ -2.17
RSB1Q08417 YOL083C-AYOL083C-A 141 nt1.5□□□□□ -2.17
RSB1Q08417 SXM1YDR395W 2835 nt1.49□□□□□ -2.17
RSB1Q08417 CCH1YGR217W 6120 nt1.49□□□□□ -2.17
RSB1Q08417 FIG2YCR089W 4830 nt1.48□□□□□ -2.17
RSB1Q08417 RPS26AYGL189C 360 nt1.48□□□□□ -2.17
RSB1Q08417 tQ(UUG)E2tQ(UUG)E2 72 nt1.46□□□□□ -2.18
RSB1Q08417 UBP3YER151C 2739 nt1.46□□□□□ -2.18
RSB1Q08417 PET127YOR017W 2403 nt1.45□□□□□ -2.18
RSB1Q08417 YSP1YHR155W 3687 nt1.45□□□□□ -2.18
RSB1Q08417 SPC110YDR356W 2835 nt1.45□□□□□ -2.18
RSB1Q08417 PIK1YNL267W 3201 nt1.44□□□□□ -2.18
RSB1Q08417 YBR196C-AYBR196C-A 150 nt1.44□□□□□ -2.18
RSB1Q08417 ULP2YIL031W 3105 nt1.44□□□□□ -2.18
RSB1Q08417 SEC10YLR166C 2616 nt1.43□□□□□ -2.18
RSB1Q08417 SSK2YNR031C 4740 nt1.43□□□□□ -2.18
RSB1Q08417 GLG1YKR058W 1851 nt1.39□□□□□ -2.19
RSB1Q08417 YGR130CYGR130C 2451 nt1.39□□□□□ -2.19
RSB1Q08417 FYV8YGR196C 2454 nt1.39□□□□□ -2.19
RSB1Q08417 BEM3YPL115C 3387 nt1.38□□□□□ -2.19
RSB1Q08417 LAA1YJL207C 6045 nt1.38□□□□□ -2.19
RSB1Q08417 YOL164W-AYOL164W-A 183 nt1.37□□□□□ -2.19
RSB1Q08417 HKR1YDR420W 5409 nt1.37□□□□□ -2.19
RSB1Q08417 NST1YNL091W 3723 nt1.36□□□□□ -2.19
RSB1Q08417 tH(GUG)E1tH(GUG)E1 72 nt1.36□□□□□ -2.19
RSB1Q08417 tH(GUG)E2tH(GUG)E2 72 nt1.36□□□□□ -2.19
RSB1Q08417 tH(GUG)G1tH(GUG)G1 72 nt1.36□□□□□ -2.19
RSB1Q08417 tH(GUG)G2tH(GUG)G2 72 nt1.36□□□□□ -2.19
RSB1Q08417 tH(GUG)HtH(GUG)H 72 nt1.36□□□□□ -2.19
RSB1Q08417 tH(GUG)KtH(GUG)K 72 nt1.36□□□□□ -2.19
RSB1Q08417 tH(GUG)MtH(GUG)M 72 nt1.36□□□□□ -2.19
RSB1Q08417 YLR286W-AYLR286W-A 135 nt1.35□□□□□ -2.19
RSB1Q08417 HUG1YML058W-A 207 nt1.35□□□□□ -2.19
RSB1Q08417 YDR034C-AYDR034C-A 177 nt1.33□□□□□ -2.2
RSB1Q08417 YGR240C-AYGR240C-A 201 nt1.32□□□□□ -2.2
RSB1Q08417 IML1YJR138W 4755 nt1.31□□□□□ -2.2
RSB1Q08417 tD(GUC)QtD(GUC)Q 75 nt1.29□□□□□ -2.2
RSB1Q08417 YBL100W-CYBL100W-C 120 nt1.29□□□□□ -2.2
RSB1Q08417 ORC3YLL004W 1851 nt1.28□□□□□ -2.2
RSB1Q08417 EST1YLR233C 2100 nt1.28□□□□□ -2.2
RSB1Q08417 snR69snR69 101 nt1.25□□□□□ -2.21
RSB1Q08417 BUL2YML111W 2763 nt1.25□□□□□ -2.21
RSB1Q08417 CSE1YGL238W 2883 nt1.25□□□□□ -2.21
RSB1Q08417 YLL006W-AYLL006W-A 177 nt1.21□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 95.2 ms