Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 DOT1L-204ENST00000457590 2907 ntTSL 512.14□□□□□ -0.472e-7■■□□□ 14.2
SRSF1Q07955 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.722e-7■■□□□ 14.2
SRSF1Q07955 ACAP3-209ENST00000476572 819 ntTSL 515.15■□□□□ 0.023e-10■■□□□ 14.2
SRSF1Q07955 ACAP3-206ENST00000467278 2725 ntTSL 1 (best)13.11□□□□□ -0.313e-10■■□□□ 14.2
SRSF1Q07955 CCNL2-217ENST00000492998 745 ntTSL 316.01■□□□□ 0.151e-7■■□□□ 14.2
SRSF1Q07955 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.31□□□□□ -0.281e-7■■□□□ 14.2
SRSF1Q07955 CCNL2-206ENST00000463260 1941 ntTSL 1 (best)13.01□□□□□ -0.331e-7■■□□□ 14.2
SRSF1Q07955 CCNL2-211ENST00000480479 2792 ntTSL 29.69□□□□□ -0.861e-7■■□□□ 14.2
SRSF1Q07955 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.077e-9■■□□□ 14.2
SRSF1Q07955 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.16■□□□□ 0.027e-9■■□□□ 14.2
SRSF1Q07955 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.087e-9■■□□□ 14.2
SRSF1Q07955 CDK5RAP3-230ENST00000584042 638 ntTSL 314.39□□□□□ -0.116e-7■■□□□ 14.2
SRSF1Q07955 AL136295.5-201ENST00000558468 4798 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.942e-6■■□□□ 14.1
SRSF1Q07955 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)24.24■■□□□ 1.472e-8■■□□□ 14.1
SRSF1Q07955 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.54■□□□□ 0.41e-6■■□□□ 14.1
SRSF1Q07955 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.821e-6■■□□□ 14.1
SRSF1Q07955 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.881e-6■■□□□ 14.1
SRSF1Q07955 PGGHG-207ENST00000482937 734 ntTSL 514.81□□□□□ -0.042e-7■■□□□ 14.1
SRSF1Q07955 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.551e-7■■□□□ 14.1
SRSF1Q07955 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.571e-7■■□□□ 14.1
SRSF1Q07955 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.575e-7■■□□□ 14.1
SRSF1Q07955 DOCK4-212ENST00000476846 3218 ntTSL 511.12□□□□□ -0.635e-7■■□□□ 14.1
SRSF1Q07955 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.835e-7■■□□□ 14.1
SRSF1Q07955 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC10.39□□□□□ -0.758e-8■■□□□ 14.1
SRSF1Q07955 ACAA1-204ENST00000418880 737 ntTSL 318.5■□□□□ 0.551e-6■■□□□ 14.1
SRSF1Q07955 KIF22-206ENST00000565736 1568 ntTSL 216.39■□□□□ 0.212e-8■■□□□ 14.1
SRSF1Q07955 KIF22-207ENST00000568312 781 ntTSL 311.01□□□□□ -0.652e-8■■□□□ 14.1
SRSF1Q07955 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.11e-7■■□□□ 14.1
SRSF1Q07955 CCNL2-216ENST00000488340 1598 ntTSL 218.95■□□□□ 0.624e-8■■□□□ 14.1
SRSF1Q07955 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 04e-8■■□□□ 14.1
SRSF1Q07955 CCNL2-213ENST00000481223 2815 ntTSL 214.01□□□□□ -0.174e-8■■□□□ 14.1
SRSF1Q07955 CCNL2-208ENST00000469113 707 ntTSL 313.49□□□□□ -0.254e-8■■□□□ 14.1
SRSF1Q07955 CCNL2-215ENST00000482621 2059 ntTSL 212.85□□□□□ -0.354e-8■■□□□ 14.1
SRSF1Q07955 CCNL2-218ENST00000496007 4452 ntTSL 210.46□□□□□ -0.744e-8■■□□□ 14.1
SRSF1Q07955 ENOSF1-204ENST00000577334 425 ntTSL 25.47□□□□□ -1.539e-8■■□□□ 14.1
SRSF1Q07955 ISYNA1-204ENST00000577916 2148 ntTSL 518.68■□□□□ 0.589e-9■■□□□ 14
SRSF1Q07955 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.259e-9■■□□□ 14
SRSF1Q07955 ISYNA1-211ENST00000582811 2039 ntTSL 216.24■□□□□ 0.199e-9■■□□□ 14
SRSF1Q07955 ISYNA1-210ENST00000582770 1654 ntTSL 215.08■□□□□ 09e-9■■□□□ 14
SRSF1Q07955 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.72□□□□□ -0.059e-9■■□□□ 14
SRSF1Q07955 ISYNA1-203ENST00000577820 1466 ntTSL 512.85□□□□□ -0.359e-9■■□□□ 14
SRSF1Q07955 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.47□□□□□ -0.419e-12■■□□□ 14
SRSF1Q07955 GPBP1L1-212ENST00000495616 594 ntTSL 26.98□□□□□ -1.295e-6■■□□□ 14
SRSF1Q07955 ERCC3-207ENST00000490062 576 ntTSL 415.7■□□□□ 0.15e-7■■□□□ 14
SRSF1Q07955 ERCC3-206ENST00000462306 963 ntTSL 1 (best)14.63□□□□□ -0.075e-7■■□□□ 14
SRSF1Q07955 ERCC3-209ENST00000494464 1367 ntTSL 1 (best)12.41□□□□□ -0.425e-7■■□□□ 14
SRSF1Q07955 ERCC3-202ENST00000426778 2916 ntTSL 210.89□□□□□ -0.675e-7■■□□□ 14
SRSF1Q07955 ERCC3-203ENST00000445889 2920 ntTSL 210.85□□□□□ -0.675e-7■■□□□ 14
SRSF1Q07955 ERCC3-201ENST00000285398 2750 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.075e-7■■□□□ 14
SRSF1Q07955 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.378e-8■■□□□ 14
SRSF1Q07955 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC9.78□□□□□ -0.846e-9■■□□□ 14
SRSF1Q07955 TRABD-206ENST00000472677 1661 ntTSL 1 (best)18.92■□□□□ 0.625e-7■■□□□ 14
SRSF1Q07955 AC087633.2-202ENST00000565166 1439 ntBASIC18.29■□□□□ 0.525e-7■■□□□ 14
SRSF1Q07955 OSGEP-203ENST00000553640 578 ntTSL 318.15■□□□□ 0.55e-7■■□□□ 14
SRSF1Q07955 CPNE7-208ENST00000566398 672 ntTSL 317.84■□□□□ 0.455e-7■■□□□ 14
SRSF1Q07955 AC087633.2-203ENST00000618377 489 ntTSL 517.71■□□□□ 0.435e-7■■□□□ 14
SRSF1Q07955 OSGEP-205ENST00000554699 762 ntTSL 317.68■□□□□ 0.425e-7■■□□□ 14
SRSF1Q07955 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.365e-7■■□□□ 14
SRSF1Q07955 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.335e-7■■□□□ 14
SRSF1Q07955 SNX2-202ENST00000505854 908 ntTSL 217.08■□□□□ 0.325e-7■■□□□ 14
SRSF1Q07955 OSGEP-211ENST00000556252 830 ntTSL 316.85■□□□□ 0.295e-7■■□□□ 14
SRSF1Q07955 SNX2-211ENST00000512394 763 ntTSL 316.22■□□□□ 0.195e-7■■□□□ 14
SRSF1Q07955 SNX2-205ENST00000506874 200 ntTSL 315.94■□□□□ 0.145e-7■■□□□ 14
SRSF1Q07955 TRABD-205ENST00000463233 2404 ntTSL 1 (best)15.53■□□□□ 0.085e-7■■□□□ 14
SRSF1Q07955 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.43■□□□□ 0.061e-7■■□□□ 14
SRSF1Q07955 DUS3L-208ENST00000590110 977 ntTSL 215.34■□□□□ 0.055e-7■■□□□ 14
SRSF1Q07955 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.025e-7■■□□□ 14
SRSF1Q07955 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.87□□□□□ -0.031e-7■■□□□ 14
SRSF1Q07955 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.035e-7■■□□□ 14
SRSF1Q07955 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.065e-7■■□□□ 14
SRSF1Q07955 DENND4B-210ENST00000485359 891 ntTSL 214.53□□□□□ -0.085e-7■■□□□ 14
SRSF1Q07955 OSGEP-212ENST00000556439 1011 ntTSL 214.53□□□□□ -0.085e-7■■□□□ 14
SRSF1Q07955 SNX2-203ENST00000505934 819 ntTSL 214.26□□□□□ -0.135e-7■■□□□ 14
SRSF1Q07955 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.155e-7■■□□□ 14
SRSF1Q07955 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.185e-7■■□□□ 14
SRSF1Q07955 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.185e-7■■□□□ 14
SRSF1Q07955 DUS3L-206ENST00000589854 566 ntTSL 213.42□□□□□ -0.265e-7■■□□□ 14
SRSF1Q07955 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.28□□□□□ -0.285e-7■■□□□ 14
SRSF1Q07955 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.325e-7■■□□□ 14
SRSF1Q07955 TPCN1-219ENST00000552077 3293 ntTSL 212.49□□□□□ -0.415e-7■■□□□ 14
SRSF1Q07955 TPCN1-203ENST00000428632 2296 ntTSL 212.49□□□□□ -0.415e-7■■□□□ 14
SRSF1Q07955 EMC1-205ENST00000467423 589 ntTSL 212.26□□□□□ -0.455e-7■■□□□ 14
SRSF1Q07955 DUS3L-204ENST00000589085 2301 ntTSL 512.07□□□□□ -0.485e-7■■□□□ 14
SRSF1Q07955 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.97□□□□□ -0.495e-7■■□□□ 14
SRSF1Q07955 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.55e-7■■□□□ 14
SRSF1Q07955 AP1G2-216ENST00000554982 716 ntTSL 411.49□□□□□ -0.571e-10■■□□□ 14
SRSF1Q07955 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.43□□□□□ -0.585e-7■■□□□ 14
SRSF1Q07955 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.65e-7■■□□□ 14
SRSF1Q07955 AP1G2-217ENST00000555118 362 ntTSL 511.22□□□□□ -0.615e-7■■□□□ 14
SRSF1Q07955 SNHG17-202ENST00000414142 2102 ntTSL 210.92□□□□□ -0.661e-7■■□□□ 14
SRSF1Q07955 AP1G2-229ENST00000557132 474 ntTSL 310.91□□□□□ -0.665e-7■■□□□ 14
SRSF1Q07955 TPCN1-218ENST00000551127 2975 ntTSL 210.72□□□□□ -0.695e-7■■□□□ 14
SRSF1Q07955 DENND4B-202ENST00000368646 3781 ntAPPRIS ALT2 TSL 510.59□□□□□ -0.715e-7■■□□□ 14
SRSF1Q07955 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.775e-7■■□□□ 14
SRSF1Q07955 AP1G2-224ENST00000556741 353 ntTSL 210.06□□□□□ -0.81e-10■■□□□ 14
SRSF1Q07955 AP1G2-230ENST00000557162 561 ntTSL 49.92□□□□□ -0.821e-10■■□□□ 14
SRSF1Q07955 TPCN1-210ENST00000547955 609 ntTSL 59.78□□□□□ -0.845e-7■■□□□ 14
SRSF1Q07955 TPCN1-204ENST00000541517 5173 ntTSL 5 BASIC9.57□□□□□ -0.885e-7■■□□□ 14
SRSF1Q07955 EMC1-201ENST00000375199 5408 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.945e-7■■□□□ 14
SRSF1Q07955 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC8.7□□□□□ -1.021e-7■■□□□ 14
Retrieved 100 of 14,836 protein–RNA pairs in 89.5 ms