Protein–RNA interactions for Protein: Q07442

BDF2, Bromodomain-containing factor 2, yeastyeast

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDF2Q07442 YOL083C-AYOL083C-A 141 nt1.83□□□□□ -2.12
BDF2Q07442 SXM1YDR395W 2835 nt1.83□□□□□ -2.12
BDF2Q07442 UTP8YGR128C 2142 nt1.82□□□□□ -2.12
BDF2Q07442 YAR009CYAR009C 3591 nt1.82□□□□□ -2.12
BDF2Q07442 YBL071C-BYBL071C-B 99 nt1.81□□□□□ -2.12
BDF2Q07442 SSK2YNR031C 4740 nt1.81□□□□□ -2.12
BDF2Q07442 MEC1YBR136W 7107 nt1.8□□□□□ -2.12
BDF2Q07442 APL1YJR005W 2103 nt1.8□□□□□ -2.12
BDF2Q07442 CLU1YMR012W 3834 nt1.8□□□□□ -2.12
BDF2Q07442 YBR072C-AYBR072C-A 162 nt1.8□□□□□ -2.12
BDF2Q07442 SWI4YER111C 3282 nt1.8□□□□□ -2.12
BDF2Q07442 AZF1YOR113W 2745 nt1.79□□□□□ -2.12
BDF2Q07442 FIG2YCR089W 4830 nt1.78□□□□□ -2.12
BDF2Q07442 EAF1YDR359C 2949 nt1.78□□□□□ -2.12
BDF2Q07442 YLR419WYLR419W 4308 nt1.78□□□□□ -2.12
BDF2Q07442 YNL266WYNL266W 420 nt1.78□□□□□ -2.12
BDF2Q07442 STO1YMR125W 2586 nt1.78□□□□□ -2.12
BDF2Q07442 NUP145YGL092W 3954 nt1.77□□□□□ -2.13
BDF2Q07442 BFR2YDR299W 1605 nt1.77□□□□□ -2.13
BDF2Q07442 EST2YLR318W 2655 nt1.77□□□□□ -2.13
BDF2Q07442 YLL020CYLL020C 306 nt1.77□□□□□ -2.13
BDF2Q07442 ROM2YLR371W 4071 nt1.76□□□□□ -2.13
BDF2Q07442 TAH1YCR060W 336 nt1.76□□□□□ -2.13
BDF2Q07442 YDR210WYDR210W 228 nt1.76□□□□□ -2.13
BDF2Q07442 YOR161W-AYOR161W-A 81 nt1.76□□□□□ -2.13
BDF2Q07442 RSM22YKL155C 1887 nt1.75□□□□□ -2.13
BDF2Q07442 LAA1YJL207C 6045 nt1.75□□□□□ -2.13
BDF2Q07442 APL3YBL037W 3078 nt1.75□□□□□ -2.13
BDF2Q07442 YGL123C-AYGL123C-A 231 nt1.74□□□□□ -2.13
BDF2Q07442 BIR1YJR089W 2865 nt1.74□□□□□ -2.13
BDF2Q07442 CDC25YLR310C 4770 nt1.74□□□□□ -2.13
BDF2Q07442 KAP120YPL125W 3099 nt1.74□□□□□ -2.13
BDF2Q07442 WAR1YML076C 2835 nt1.72□□□□□ -2.13
BDF2Q07442 tM(CAU)Q2tM(CAU)Q2 78 nt1.72□□□□□ -2.13
BDF2Q07442 YBR200W-AYBR200W-A 165 nt1.72□□□□□ -2.13
BDF2Q07442 snR53snR53 91 nt1.72□□□□□ -2.13
BDF2Q07442 MSN5YDR335W 3675 nt1.71□□□□□ -2.14
BDF2Q07442 SEC3YER008C 4011 nt1.7□□□□□ -2.14
BDF2Q07442 POL5YEL055C 3069 nt1.7□□□□□ -2.14
BDF2Q07442 RPS26AYGL189C 360 nt1.7□□□□□ -2.14
BDF2Q07442 GLG1YKR058W 1851 nt1.7□□□□□ -2.14
BDF2Q07442 YLR232WYLR232W 348 nt1.7□□□□□ -2.14
BDF2Q07442 SEC1YDR164C 2175 nt1.69□□□□□ -2.14
BDF2Q07442 IML1YJR138W 4755 nt1.68□□□□□ -2.14
BDF2Q07442 YGR240C-AYGR240C-A 201 nt1.68□□□□□ -2.14
BDF2Q07442 YJL127W-AYJL127W-A 117 nt1.68□□□□□ -2.14
BDF2Q07442 YOL164W-AYOL164W-A 183 nt1.68□□□□□ -2.14
BDF2Q07442 FYV10YIL097W 1551 nt1.68□□□□□ -2.14
BDF2Q07442 tH(GUG)E1tH(GUG)E1 72 nt1.67□□□□□ -2.14
BDF2Q07442 tH(GUG)E2tH(GUG)E2 72 nt1.67□□□□□ -2.14
BDF2Q07442 tH(GUG)G1tH(GUG)G1 72 nt1.67□□□□□ -2.14
BDF2Q07442 tH(GUG)G2tH(GUG)G2 72 nt1.67□□□□□ -2.14
BDF2Q07442 tH(GUG)HtH(GUG)H 72 nt1.67□□□□□ -2.14
BDF2Q07442 tH(GUG)KtH(GUG)K 72 nt1.67□□□□□ -2.14
BDF2Q07442 tH(GUG)MtH(GUG)M 72 nt1.67□□□□□ -2.14
BDF2Q07442 IRA1YBR140C 9279 nt1.67□□□□□ -2.14
BDF2Q07442 ORC3YLL004W 1851 nt1.67□□□□□ -2.14
BDF2Q07442 NUP188YML103C 4968 nt1.67□□□□□ -2.14
BDF2Q07442 PIK1YNL267W 3201 nt1.66□□□□□ -2.14
BDF2Q07442 NOP9YJL010C 2001 nt1.64□□□□□ -2.15
BDF2Q07442 COX5BYIL111W 456 nt1.63□□□□□ -2.15
BDF2Q07442 YKL100W-AYKL100W-A 90 nt1.63□□□□□ -2.15
BDF2Q07442 snR47snR47 99 nt1.63□□□□□ -2.15
BDF2Q07442 ASE1YOR058C 2658 nt1.62□□□□□ -2.15
BDF2Q07442 YBL100W-CYBL100W-C 120 nt1.62□□□□□ -2.15
BDF2Q07442 TRM732YMR259C 4263 nt1.61□□□□□ -2.15
BDF2Q07442 snR64snR64 101 nt1.61□□□□□ -2.15
BDF2Q07442 SEC21YNL287W 2808 nt1.61□□□□□ -2.15
BDF2Q07442 PAU12YGR294W 363 nt1.6□□□□□ -2.15
BDF2Q07442 PAU24YBR301W 363 nt1.6□□□□□ -2.15
BDF2Q07442 RPL26BYGR034W 384 nt1.59□□□□□ -2.15
BDF2Q07442 tQ(UUG)E2tQ(UUG)E2 72 nt1.59□□□□□ -2.15
BDF2Q07442 YLR286W-AYLR286W-A 135 nt1.59□□□□□ -2.15
BDF2Q07442 YGR146C-AYGR146C-A 162 nt1.58□□□□□ -2.16
BDF2Q07442 YBR196C-AYBR196C-A 150 nt1.58□□□□□ -2.16
BDF2Q07442 PET127YOR017W 2403 nt1.58□□□□□ -2.16
BDF2Q07442 GEA2YEL022W 4380 nt1.57□□□□□ -2.16
BDF2Q07442 MYO1YHR023W 5787 nt1.56□□□□□ -2.16
BDF2Q07442 YML002WYML002W 2214 nt1.56□□□□□ -2.16
BDF2Q07442 FYV8YGR196C 2454 nt1.55□□□□□ -2.16
BDF2Q07442 YLR041WYLR041W 321 nt1.55□□□□□ -2.16
BDF2Q07442 tV(UAC)BtV(UAC)B 74 nt1.54□□□□□ -2.16
BDF2Q07442 tV(UAC)DtV(UAC)D 74 nt1.54□□□□□ -2.16
BDF2Q07442 snR50snR50 90 nt1.54□□□□□ -2.16
BDF2Q07442 SPC110YDR356W 2835 nt1.54□□□□□ -2.16
BDF2Q07442 YER078W-AYER078W-A 165 nt1.52□□□□□ -2.17
BDF2Q07442 YBR109W-AYBR109W-A 225 nt1.52□□□□□ -2.17
BDF2Q07442 CDC39YCR093W 6327 nt1.5□□□□□ -2.17
BDF2Q07442 UBP3YER151C 2739 nt1.49□□□□□ -2.17
BDF2Q07442 SIP4YJL089W 2490 nt1.48□□□□□ -2.17
BDF2Q07442 SEC10YLR166C 2616 nt1.48□□□□□ -2.17
BDF2Q07442 snR190snR190 190 nt1.48□□□□□ -2.17
BDF2Q07442 YDL073WYDL073W 2955 nt1.47□□□□□ -2.17
BDF2Q07442 NNF2YGR089W 2811 nt1.47□□□□□ -2.17
BDF2Q07442 SEC8YPR055W 3198 nt1.45□□□□□ -2.18
BDF2Q07442 YKL225WYKL225W 348 nt1.45□□□□□ -2.18
BDF2Q07442 YLR149C-AYLR149C-A 87 nt1.44□□□□□ -2.18
BDF2Q07442 HKR1YDR420W 5409 nt1.43□□□□□ -2.18
BDF2Q07442 YNL284C-BYNL284C-B 5268 nt1.42□□□□□ -2.18
BDF2Q07442 YDL159W-AYDL159W-A 132 nt1.41□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms