Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 DNF3YMR162C 4971 nt1.71□□□□□ -2.14
NPL3Q01560 tT(UGU)HtT(UGU)H 72 nt1.71□□□□□ -2.14
NPL3Q01560 SWI4YER111C 3282 nt1.71□□□□□ -2.14
NPL3Q01560 EAF1YDR359C 2949 nt1.7□□□□□ -2.14 RIP-Chip
NPL3Q01560 COX5BYIL111W 456 nt1.69□□□□□ -2.14
NPL3Q01560 YAL037C-AYAL037C-A 93 nt1.69□□□□□ -2.14
NPL3Q01560 HUG1YML058W-A 207 nt1.69□□□□□ -2.14
NPL3Q01560 snR62snR62 100 nt1.68□□□□□ -2.14
NPL3Q01560 YJL127W-AYJL127W-A 117 nt1.68□□□□□ -2.14
NPL3Q01560 WAR1YML076C 2835 nt1.68□□□□□ -2.14
NPL3Q01560 AZF1YOR113W 2745 nt1.68□□□□□ -2.14
NPL3Q01560 SEC21YNL287W 2808 nt1.67□□□□□ -2.14
NPL3Q01560 NUP192YJL039C 5052 nt1.67□□□□□ -2.14
NPL3Q01560 PMD1YER132C 5262 nt1.67□□□□□ -2.14
NPL3Q01560 APL3YBL037W 3078 nt1.67□□□□□ -2.14
NPL3Q01560 NUP145YGL092W 3954 nt1.66□□□□□ -2.14
NPL3Q01560 PIK1YNL267W 3201 nt1.66□□□□□ -2.14
NPL3Q01560 YML002WYML002W 2214 nt1.66□□□□□ -2.14
NPL3Q01560 BRR2YER172C 6492 nt1.65□□□□□ -2.15
NPL3Q01560 YNL266WYNL266W 420 nt1.65□□□□□ -2.15
NPL3Q01560 YBR200W-AYBR200W-A 165 nt1.65□□□□□ -2.15
NPL3Q01560 EST2YLR318W 2655 nt1.65□□□□□ -2.15
NPL3Q01560 NOP9YJL010C 2001 nt1.64□□□□□ -2.15
NPL3Q01560 YDR210WYDR210W 228 nt1.64□□□□□ -2.15 RIP-Chip
NPL3Q01560 YOL083C-AYOL083C-A 141 nt1.64□□□□□ -2.15
NPL3Q01560 YBR072C-AYBR072C-A 162 nt1.64□□□□□ -2.15
NPL3Q01560 KAP120YPL125W 3099 nt1.64□□□□□ -2.15
NPL3Q01560 SXM1YDR395W 2835 nt1.63□□□□□ -2.15
NPL3Q01560 BIR1YJR089W 2865 nt1.63□□□□□ -2.15
NPL3Q01560 COG6YNL041C 2520 nt1.63□□□□□ -2.15
NPL3Q01560 YLR232WYLR232W 348 nt1.62□□□□□ -2.15
NPL3Q01560 NUP188YML103C 4968 nt1.61□□□□□ -2.15
NPL3Q01560 ROM2YLR371W 4071 nt1.61□□□□□ -2.15
NPL3Q01560 CDC25YLR310C 4770 nt1.61□□□□□ -2.15
NPL3Q01560 FYV10YIL097W 1551 nt1.6□□□□□ -2.15
NPL3Q01560 TRM732YMR259C 4263 nt1.6□□□□□ -2.15
NPL3Q01560 CAT8YMR280C 4302 nt1.59□□□□□ -2.15
NPL3Q01560 SEC1YDR164C 2175 nt1.59□□□□□ -2.16
NPL3Q01560 GEA2YEL022W 4380 nt1.59□□□□□ -2.16
NPL3Q01560 CLU1YMR012W 3834 nt1.58□□□□□ -2.16
NPL3Q01560 RPL26BYGR034W 384 nt1.58□□□□□ -2.16 RIP-Chip
NPL3Q01560 FIG2YCR089W 4830 nt1.56□□□□□ -2.16
NPL3Q01560 YDR034C-AYDR034C-A 177 nt1.56□□□□□ -2.16
NPL3Q01560 YGR146C-AYGR146C-A 162 nt1.56□□□□□ -2.16
NPL3Q01560 MSN5YDR335W 3675 nt1.56□□□□□ -2.16
NPL3Q01560 YBL071C-BYBL071C-B 99 nt1.55□□□□□ -2.16
NPL3Q01560 SEC3YER008C 4011 nt1.55□□□□□ -2.16
NPL3Q01560 CHS1YNL192W 3396 nt1.55□□□□□ -2.16
NPL3Q01560 YLR041WYLR041W 321 nt1.54□□□□□ -2.16
NPL3Q01560 snR190snR190 190 nt1.53□□□□□ -2.16
NPL3Q01560 CCH1YGR217W 6120 nt1.53□□□□□ -2.16
NPL3Q01560 MSH3YCR092C 3057 nt1.53□□□□□ -2.17
NPL3Q01560 SPC110YDR356W 2835 nt1.51□□□□□ -2.17
NPL3Q01560 YBL100W-CYBL100W-C 120 nt1.51□□□□□ -2.17
NPL3Q01560 YBR196C-AYBR196C-A 150 nt1.5□□□□□ -2.17
NPL3Q01560 SSK2YNR031C 4740 nt1.49□□□□□ -2.17
NPL3Q01560 CDC39YCR093W 6327 nt1.49□□□□□ -2.17
NPL3Q01560 YOL164W-AYOL164W-A 183 nt1.47□□□□□ -2.17
NPL3Q01560 ASE1YOR058C 2658 nt1.47□□□□□ -2.17
NPL3Q01560 HKR1YDR420W 5409 nt1.46□□□□□ -2.18
NPL3Q01560 RPS26AYGL189C 360 nt1.46□□□□□ -2.18 RIP-Chip
NPL3Q01560 YGR240C-AYGR240C-A 201 nt1.46□□□□□ -2.18
NPL3Q01560 RAD9YDR217C 3930 nt1.46□□□□□ -2.18
NPL3Q01560 LAA1YJL207C 6045 nt1.45□□□□□ -2.18
NPL3Q01560 PET127YOR017W 2403 nt1.45□□□□□ -2.18
NPL3Q01560 SEC8YPR055W 3198 nt1.45□□□□□ -2.18
NPL3Q01560 BEM3YPL115C 3387 nt1.43□□□□□ -2.18
NPL3Q01560 PAU12YGR294W 363 nt1.43□□□□□ -2.18
NPL3Q01560 PAU24YBR301W 363 nt1.43□□□□□ -2.18
NPL3Q01560 PRP16YKR086W 3216 nt1.41□□□□□ -2.18
NPL3Q01560 YDL073WYDL073W 2955 nt1.41□□□□□ -2.18
NPL3Q01560 snR47snR47 99 nt1.4□□□□□ -2.19
NPL3Q01560 UBP3YER151C 2739 nt1.4□□□□□ -2.19
NPL3Q01560 SEC10YLR166C 2616 nt1.4□□□□□ -2.19
NPL3Q01560 YGR130CYGR130C 2451 nt1.4□□□□□ -2.19 RIP-Chip
NPL3Q01560 FYV8YGR196C 2454 nt1.4□□□□□ -2.19
NPL3Q01560 YLR399W-AYLR399W-A 105 nt1.38□□□□□ -2.19
NPL3Q01560 YLR286W-AYLR286W-A 135 nt1.37□□□□□ -2.19
NPL3Q01560 tQ(UUG)E2tQ(UUG)E2 72 nt1.36□□□□□ -2.19
NPL3Q01560 NNF2YGR089W 2811 nt1.34□□□□□ -2.19
NPL3Q01560 tN(GUU)QtN(GUU)Q 71 nt1.34□□□□□ -2.19
NPL3Q01560 YPR160W-AYPR160W-A 81 nt1.34□□□□□ -2.19
NPL3Q01560 YNL284C-BYNL284C-B 5268 nt1.33□□□□□ -2.2
NPL3Q01560 RPM2YML091C 3609 nt1.33□□□□□ -2.2
NPL3Q01560 ORC3YLL004W 1851 nt1.33□□□□□ -2.2
NPL3Q01560 snR53snR53 91 nt1.32□□□□□ -2.2
NPL3Q01560 GLG1YKR058W 1851 nt1.31□□□□□ -2.2
NPL3Q01560 tH(GUG)E1tH(GUG)E1 72 nt1.31□□□□□ -2.2
NPL3Q01560 tH(GUG)E2tH(GUG)E2 72 nt1.31□□□□□ -2.2
NPL3Q01560 tH(GUG)G1tH(GUG)G1 72 nt1.31□□□□□ -2.2
NPL3Q01560 tH(GUG)G2tH(GUG)G2 72 nt1.31□□□□□ -2.2
NPL3Q01560 tH(GUG)HtH(GUG)H 72 nt1.31□□□□□ -2.2
NPL3Q01560 tH(GUG)KtH(GUG)K 72 nt1.31□□□□□ -2.2
NPL3Q01560 tH(GUG)MtH(GUG)M 72 nt1.31□□□□□ -2.2
NPL3Q01560 IML1YJR138W 4755 nt1.3□□□□□ -2.2
NPL3Q01560 snR64snR64 101 nt1.29□□□□□ -2.2
NPL3Q01560 tD(GUC)QtD(GUC)Q 75 nt1.29□□□□□ -2.2
NPL3Q01560 SPT7YBR081C 3999 nt1.26□□□□□ -2.21
NPL3Q01560 YLR299C-AYLR299C-A 93 nt1.26□□□□□ -2.21
NPL3Q01560 YSP1YHR155W 3687 nt1.26□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 344.6 ms