Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.88■□□□□ 0.45
H3F3AP84243 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H3F3AP84243 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H3F3AP84243 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.88■□□□□ 0.45
H3F3AP84243 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.88■□□□□ 0.45
H3F3AP84243 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H3F3AP84243 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H3F3AP84243 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
H3F3AP84243 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H3F3AP84243 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.88■□□□□ 0.45
H3F3AP84243 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.88■□□□□ 0.45
H3F3AP84243 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.88■□□□□ 0.45
H3F3AP84243 KRT18P6-201ENST00000555540 1265 ntBASIC17.88■□□□□ 0.45
H3F3AP84243 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
H3F3AP84243 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H3F3AP84243 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H3F3AP84243 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H3F3AP84243 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H3F3AP84243 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H3F3AP84243 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
H3F3AP84243 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
H3F3AP84243 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
H3F3AP84243 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
H3F3AP84243 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
H3F3AP84243 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H3F3AP84243 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H3F3AP84243 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.87■□□□□ 0.45
H3F3AP84243 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.87■□□□□ 0.45
H3F3AP84243 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.87■□□□□ 0.45
H3F3AP84243 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.87■□□□□ 0.45
H3F3AP84243 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H3F3AP84243 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.87■□□□□ 0.45
H3F3AP84243 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H3F3AP84243 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.87■□□□□ 0.45
H3F3AP84243 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H3F3AP84243 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
H3F3AP84243 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.87■□□□□ 0.45
H3F3AP84243 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
H3F3AP84243 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.86■□□□□ 0.45
H3F3AP84243 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
H3F3AP84243 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.86■□□□□ 0.45
H3F3AP84243 AL390719.1-204ENST00000412397 1219 ntBASIC17.86■□□□□ 0.45
H3F3AP84243 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.86■□□□□ 0.45
H3F3AP84243 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.86■□□□□ 0.45
H3F3AP84243 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.86■□□□□ 0.45
H3F3AP84243 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.86■□□□□ 0.45
H3F3AP84243 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.86■□□□□ 0.45
H3F3AP84243 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.86■□□□□ 0.45
H3F3AP84243 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.86■□□□□ 0.45
H3F3AP84243 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 AL391422.3-201ENST00000603791 2761 ntBASIC17.86■□□□□ 0.45
H3F3AP84243 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
H3F3AP84243 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
H3F3AP84243 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.86■□□□□ 0.45
H3F3AP84243 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.86■□□□□ 0.45
H3F3AP84243 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.86■□□□□ 0.45
H3F3AP84243 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
H3F3AP84243 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
H3F3AP84243 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
H3F3AP84243 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
H3F3AP84243 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
H3F3AP84243 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
H3F3AP84243 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H3F3AP84243 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H3F3AP84243 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
H3F3AP84243 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H3F3AP84243 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H3F3AP84243 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
H3F3AP84243 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
H3F3AP84243 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
H3F3AP84243 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
H3F3AP84243 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
H3F3AP84243 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.85■□□□□ 0.45
H3F3AP84243 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
H3F3AP84243 KRT16P6-202ENST00000425692 1426 ntBASIC17.85■□□□□ 0.45
H3F3AP84243 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.85■□□□□ 0.45
H3F3AP84243 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
H3F3AP84243 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.85■□□□□ 0.45
H3F3AP84243 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.85■□□□□ 0.45
H3F3AP84243 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.85■□□□□ 0.45
H3F3AP84243 UNC93B5-201ENST00000530315 699 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 261.7 ms