Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.94■□□□□ 0.94
CBX1P83916 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.93■□□□□ 0.94
CBX1P83916 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CBX1P83916 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.93■□□□□ 0.94
CBX1P83916 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CBX1P83916 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CBX1P83916 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CBX1P83916 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CBX1P83916 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CBX1P83916 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CBX1P83916 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CBX1P83916 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CBX1P83916 AL354751.1-201ENST00000412768 1863 ntBASIC20.93■□□□□ 0.94
CBX1P83916 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CBX1P83916 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CBX1P83916 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.93■□□□□ 0.94
CBX1P83916 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CBX1P83916 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
CBX1P83916 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CBX1P83916 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CBX1P83916 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CBX1P83916 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.92■□□□□ 0.94
CBX1P83916 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CBX1P83916 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 HCG11-201ENST00000411553 5696 ntBASIC20.92■□□□□ 0.94
CBX1P83916 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CBX1P83916 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX1P83916 PCDHA12-202ENST00000613593 2588 ntBASIC20.92■□□□□ 0.94
CBX1P83916 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.91■□□□□ 0.94
CBX1P83916 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX1P83916 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX1P83916 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.91■□□□□ 0.94
CBX1P83916 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
CBX1P83916 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX1P83916 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.91■□□□□ 0.94
CBX1P83916 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX1P83916 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CBX1P83916 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX1P83916 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX1P83916 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.91■□□□□ 0.94
CBX1P83916 AC090164.3-201ENST00000610780 2143 ntBASIC20.91■□□□□ 0.94
CBX1P83916 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.91■□□□□ 0.94
CBX1P83916 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.91■□□□□ 0.94
CBX1P83916 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.91■□□□□ 0.94
CBX1P83916 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX1P83916 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CBX1P83916 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX1P83916 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX1P83916 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CBX1P83916 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX1P83916 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX1P83916 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CBX1P83916 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.9■□□□□ 0.94
CBX1P83916 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX1P83916 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX1P83916 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CBX1P83916 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CBX1P83916 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CBX1P83916 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.9■□□□□ 0.94
CBX1P83916 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.9■□□□□ 0.94
CBX1P83916 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.9■□□□□ 0.94
CBX1P83916 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CBX1P83916 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CBX1P83916 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX1P83916 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX1P83916 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CBX1P83916 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CBX1P83916 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.89■□□□□ 0.94
CBX1P83916 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
CBX1P83916 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CBX1P83916 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.94
CBX1P83916 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.89■□□□□ 0.94
CBX1P83916 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CBX1P83916 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CBX1P83916 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CBX1P83916 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CBX1P83916 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CBX1P83916 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CBX1P83916 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CBX1P83916 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.89■□□□□ 0.93
CBX1P83916 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CBX1P83916 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CBX1P83916 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CBX1P83916 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CBX1P83916 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.89■□□□□ 0.93
CBX1P83916 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CBX1P83916 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms