Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.11□□□□□ -0.15
RPL39P62891 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RPL39P62891 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL39P62891 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL39P62891 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL39P62891 UNC93B3-201ENST00000308076 687 ntBASIC14.11□□□□□ -0.15
RPL39P62891 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.11□□□□□ -0.15
RPL39P62891 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.11□□□□□ -0.15
RPL39P62891 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPL39P62891 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL39P62891 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL39P62891 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL39P62891 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL39P62891 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.11□□□□□ -0.15
RPL39P62891 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL39P62891 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL39P62891 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.11□□□□□ -0.15
RPL39P62891 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
RPL39P62891 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL39P62891 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPL39P62891 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL39P62891 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
RPL39P62891 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RPL39P62891 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPL39P62891 Z82202.1-201ENST00000623446 1880 ntBASIC14.1□□□□□ -0.15
RPL39P62891 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.1□□□□□ -0.15
RPL39P62891 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPL39P62891 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL39P62891 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.1□□□□□ -0.15
RPL39P62891 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL39P62891 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL39P62891 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.1□□□□□ -0.15
RPL39P62891 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPL39P62891 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL39P62891 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.1□□□□□ -0.15
RPL39P62891 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL39P62891 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.1□□□□□ -0.15
RPL39P62891 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL39P62891 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.1□□□□□ -0.15
RPL39P62891 AC024257.2-201ENST00000549699 147 ntBASIC14.1□□□□□ -0.15
RPL39P62891 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.1□□□□□ -0.15
RPL39P62891 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL39P62891 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.1□□□□□ -0.15
RPL39P62891 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL39P62891 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.1□□□□□ -0.15
RPL39P62891 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL39P62891 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.1□□□□□ -0.15
RPL39P62891 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.1□□□□□ -0.15
RPL39P62891 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RPL39P62891 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
RPL39P62891 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL39P62891 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL39P62891 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL39P62891 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL39P62891 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL39P62891 AC099791.1-201ENST00000416440 715 ntBASIC14.09□□□□□ -0.15
RPL39P62891 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.09□□□□□ -0.15
RPL39P62891 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
RPL39P62891 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.09□□□□□ -0.15
RPL39P62891 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL39P62891 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL39P62891 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL39P62891 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
RPL39P62891 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RPL39P62891 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL39P62891 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL39P62891 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.09□□□□□ -0.15
RPL39P62891 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL39P62891 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RPL39P62891 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.09□□□□□ -0.15
RPL39P62891 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RPL39P62891 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL39P62891 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL39P62891 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
RPL39P62891 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
RPL39P62891 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
RPL39P62891 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RPL39P62891 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL39P62891 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.08□□□□□ -0.16
RPL39P62891 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL39P62891 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RPL39P62891 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.08□□□□□ -0.16
RPL39P62891 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL39P62891 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.08□□□□□ -0.16
RPL39P62891 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL39P62891 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.08□□□□□ -0.16
RPL39P62891 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.08□□□□□ -0.16
RPL39P62891 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.08□□□□□ -0.16
RPL39P62891 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.08□□□□□ -0.16
RPL39P62891 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL39P62891 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RPL39P62891 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RPL39P62891 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL39P62891 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RPL39P62891 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL39P62891 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RPL39P62891 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
RPL39P62891 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL39P62891 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.07□□□□□ -0.16
RPL39P62891 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms