Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 AC011506.1-201ENST00000474329 610 ntBASIC26.83■■□□□ 1.89
ZC3H6P61129 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H6P61129 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H6P61129 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H6P61129 KRT8P20-201ENST00000423953 1409 ntBASIC26.82■■□□□ 1.88
ZC3H6P61129 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.82■■□□□ 1.88
ZC3H6P61129 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H6P61129 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
ZC3H6P61129 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H6P61129 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H6P61129 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H6P61129 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H6P61129 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC26.82■■□□□ 1.88
ZC3H6P61129 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC26.82■■□□□ 1.88
ZC3H6P61129 GRAMD4P8-201ENST00000605465 1115 ntBASIC26.82■■□□□ 1.88
ZC3H6P61129 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC26.82■■□□□ 1.88
ZC3H6P61129 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
ZC3H6P61129 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.82■■□□□ 1.88
ZC3H6P61129 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.81■■□□□ 1.88
ZC3H6P61129 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
ZC3H6P61129 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3H6P61129 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.81■■□□□ 1.88
ZC3H6P61129 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3H6P61129 CALM3-202ENST00000391918 702 ntTSL 2 BASIC26.81■■□□□ 1.88
ZC3H6P61129 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC26.81■■□□□ 1.88
ZC3H6P61129 B3GAT3P1-201ENST00000471720 806 ntBASIC26.81■■□□□ 1.88
ZC3H6P61129 LTBR-211ENST00000543190 785 ntTSL 3 BASIC26.81■■□□□ 1.88
ZC3H6P61129 C1QL1P1-201ENST00000568105 661 ntBASIC26.81■■□□□ 1.88
ZC3H6P61129 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3H6P61129 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC26.81■■□□□ 1.88
ZC3H6P61129 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ZC3H6P61129 TSPY14P-201ENST00000303979 915 ntBASIC26.8■■□□□ 1.88
ZC3H6P61129 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC26.8■■□□□ 1.88
ZC3H6P61129 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC26.8■■□□□ 1.88
ZC3H6P61129 EGLN1P1-201ENST00000531623 762 ntBASIC26.8■■□□□ 1.88
ZC3H6P61129 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ZC3H6P61129 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC26.8■■□□□ 1.88
ZC3H6P61129 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ZC3H6P61129 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ZC3H6P61129 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ZC3H6P61129 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ZC3H6P61129 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
ZC3H6P61129 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ZC3H6P61129 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ZC3H6P61129 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H6P61129 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H6P61129 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC26.79■■□□□ 1.88
ZC3H6P61129 AC121338.2-201ENST00000622535 1744 ntBASIC26.79■■□□□ 1.88
ZC3H6P61129 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H6P61129 H19-201ENST00000411754 1788 ntTSL 5 BASIC26.79■■□□□ 1.88
ZC3H6P61129 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H6P61129 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC26.79■■□□□ 1.88
ZC3H6P61129 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC26.79■■□□□ 1.88
ZC3H6P61129 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H6P61129 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H6P61129 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC26.79■■□□□ 1.88
ZC3H6P61129 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC26.79■■□□□ 1.88
ZC3H6P61129 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC26.79■■□□□ 1.88
ZC3H6P61129 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H6P61129 AP005242.2-201ENST00000580065 1175 ntBASIC26.79■■□□□ 1.88
ZC3H6P61129 AL445675.2-201ENST00000620291 557 ntBASIC26.79■■□□□ 1.88
ZC3H6P61129 AL358472.4-201ENST00000633140 710 ntBASIC26.79■■□□□ 1.88
ZC3H6P61129 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3H6P61129 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC26.79■■□□□ 1.88
ZC3H6P61129 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC26.78■■□□□ 1.88
ZC3H6P61129 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H6P61129 AK4P3-201ENST00000418260 669 ntBASIC26.78■■□□□ 1.88
ZC3H6P61129 CRYGFP-201ENST00000418459 633 ntBASIC26.78■■□□□ 1.88
ZC3H6P61129 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H6P61129 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H6P61129 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC26.78■■□□□ 1.88
ZC3H6P61129 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H6P61129 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H6P61129 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC26.78■■□□□ 1.88
ZC3H6P61129 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
ZC3H6P61129 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3H6P61129 AC244015.2-201ENST00000616358 1861 ntBASIC26.78■■□□□ 1.88
ZC3H6P61129 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZC3H6P61129 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ZC3H6P61129 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZC3H6P61129 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZC3H6P61129 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZC3H6P61129 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZC3H6P61129 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
ZC3H6P61129 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZC3H6P61129 UPK3BP1-201ENST00000428678 509 ntBASIC26.77■■□□□ 1.88
ZC3H6P61129 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC26.77■■□□□ 1.88
ZC3H6P61129 AC097488.1-201ENST00000507834 756 ntBASIC26.77■■□□□ 1.88
ZC3H6P61129 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC26.77■■□□□ 1.88
ZC3H6P61129 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC26.77■■□□□ 1.88
ZC3H6P61129 FAM87A-204ENST00000613235 858 ntBASIC26.77■■□□□ 1.88
ZC3H6P61129 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ZC3H6P61129 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC26.76■■□□□ 1.88
ZC3H6P61129 AP006587.1-201ENST00000534129 1502 ntBASIC26.76■■□□□ 1.87
ZC3H6P61129 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC26.76■■□□□ 1.87
ZC3H6P61129 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3H6P61129 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
ZC3H6P61129 Z98882.1-201ENST00000622160 2253 ntBASIC26.76■■□□□ 1.87
ZC3H6P61129 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3H6P61129 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms