Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB38P57729 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB38P57729 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB38P57729 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB38P57729 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
RAB38P57729 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RAB38P57729 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RAB38P57729 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RAB38P57729 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB38P57729 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB38P57729 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB38P57729 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
RAB38P57729 AC026366.1-201ENST00000488803 879 ntBASIC18.81■□□□□ 0.6
RAB38P57729 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB38P57729 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB38P57729 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB38P57729 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB38P57729 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB38P57729 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB38P57729 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB38P57729 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RAB38P57729 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB38P57729 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB38P57729 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB38P57729 AC099778.1-201ENST00000568593 1911 ntBASIC18.8■□□□□ 0.6
RAB38P57729 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB38P57729 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB38P57729 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
RAB38P57729 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB38P57729 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB38P57729 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB38P57729 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RAB38P57729 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB38P57729 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB38P57729 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RAB38P57729 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB38P57729 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RAB38P57729 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.8■□□□□ 0.6
RAB38P57729 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB38P57729 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.8■□□□□ 0.6
RAB38P57729 MIR4651-201ENST00000582622 73 ntBASIC18.8■□□□□ 0.6
RAB38P57729 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB38P57729 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB38P57729 AC120498.8-201ENST00000614275 531 ntBASIC18.8■□□□□ 0.6
RAB38P57729 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB38P57729 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB38P57729 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB38P57729 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB38P57729 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB38P57729 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
RAB38P57729 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RAB38P57729 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RAB38P57729 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB38P57729 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB38P57729 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB38P57729 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB38P57729 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB38P57729 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB38P57729 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
RAB38P57729 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB38P57729 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB38P57729 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB38P57729 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RAB38P57729 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB38P57729 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB38P57729 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB38P57729 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB38P57729 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB38P57729 AC008403.3-201ENST00000598924 454 ntBASIC18.79■□□□□ 0.6
RAB38P57729 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB38P57729 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB38P57729 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB38P57729 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB38P57729 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB38P57729 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB38P57729 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RAB38P57729 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB38P57729 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB38P57729 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
RAB38P57729 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB38P57729 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB38P57729 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAB38P57729 ESRRAP1-201ENST00000400596 1257 ntBASIC18.78■□□□□ 0.6
RAB38P57729 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB38P57729 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB38P57729 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB38P57729 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.78■□□□□ 0.6
RAB38P57729 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAB38P57729 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB38P57729 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB38P57729 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB38P57729 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB38P57729 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB38P57729 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RAB38P57729 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB38P57729 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB38P57729 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RAB38P57729 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB38P57729 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB38P57729 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms